DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ab and serpinb10

DIOPT Version :9

Sequence 1:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster
Sequence 2:XP_031760330.1 Gene:serpinb10 / 100497689 XenbaseID:XB-GENE-5769609 Length:374 Species:Xenopus tropicalis


Alignment Length:366 Identity:95/366 - (25%)
Similarity:171/366 - (46%) Gaps:20/366 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DAAADRNLLAADLYNAVAADHLNENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADA 88
            |.....|....|:...::.....:|||.|..:|..|:|:.::||.|.||:::.:.|.....: |.
 Frog     2 DICTANNEFTIDVLREISKTAAGQNVVFSSMSIMISLAMVYLGAHGNTAADMGKALHFDEVE-DV 65

  Fly    89 VSQRSGSYQQALTRDNNFRL--ANNIYINENLEFKGSFRDVAQRQFDSNIDKLDF--HPPYNKRT 149
            .:|.....::.:...|::.|  .|.::..:...|..:|.......:.:.::|:||  :|   :.|
 Frog    66 HAQFRVLLKELMKNGNDYTLTTVNKLFGEKKYYFLPTFLKAINAFYGAPLEKVDFSSNP---EAT 127

  Fly   150 ADGINRAVATKTNGKITDILRAELLNDRTEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSV 214
            ...||..:..||.|||.::|....::..|..::.|.:.:.|.|...|....|.|..|...:.:.:
 Frog   128 RSYINAWIQEKTKGKIQNLLPENSISPNTVLMVANTLYFLANWTTQFSEHATSKAPFTLITNEQI 192

  Fly   215 KVDTMWTLQNFNYAEVNSLDAKVVELPY-QNPDFSMLLLLPNRKDGLRSLQQSLSGKNL--LAEI 276
            ||:.|.|:..||...:.:....|:|||| ...|.||:::||:....|..:.:.:|.:||  ....
 Frog   193 KVNMMATMNTFNMKRIKNPGMSVLELPYGDTKDLSMVIMLPDNSTVLTKVDREISYENLSKWTRS 257

  Fly   277 GAMSQQKVEVLLPKFSVTFGLGLEGPFKKLGVHTMFSRD----GDFGNMYRMFVSHFINAVEHKA 337
            ..||...:.|.||:|.:.....|:.....||:.:.||:.    ...|...:::||.    |.||.
 Frog   258 ENMSSNYLAVYLPRFRMEKSFSLKKVLSSLGMSSAFSQSRANFSGMGKQKQLYVSD----VHHKT 318

  Fly   338 NVEVTEAGVDQPLETGLLKGLFS-RSKKFEADHPFVFAIKY 377
            .:||.|.|.:....||.:..:.| .:::|:||.||.|.|::
 Frog   319 FIEVNEKGTEAASATGSVMSIRSLANEEFKADRPFHFFIRH 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 94/360 (26%)
serpinb10XP_031760330.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.