DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and ROX1

DIOPT Version :9

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_015390.1 Gene:ROX1 / 856178 SGDID:S000006269 Length:368 Species:Saccharomyces cerevisiae


Alignment Length:421 Identity:88/421 - (20%)
Similarity:157/421 - (37%) Gaps:118/421 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 IKRPMNAFMVWAQAARRVMSKQY-------PHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLR 134
            |.||.|||:::.|...|::..::       ||  ||.:||.:|..||.|:..||..:...|||.:
Yeast    10 IPRPKNAFILFRQHYHRILIDEWTAQGVEIPH--NSNISKIIGTKWKGLQPEDKAHWENLAEKEK 72

  Fly   135 MTHKQEHPDYKYQPRR--KKARVL-------PSQQSGEGGSPGPEMTLSATMGSSGKPRSSNSNG 190
            :.|::::|:|||:|.|  ||.::|       ..||..|                  :.:...|..
Yeast    73 LEHERKYPEYKYKPVRKSKKKQLLLKEIEQQQQQQQKE------------------QQQQKQSQP 119

  Fly   191 QRRAGKGNAAADLGSCASTISHANVGSNSSDVFSNEAFMKSL--------NSACAASLMEQSLI- 246
            |.:....|....:....|....::|.|::|..|.....:|.|        |...:.||....|. 
Yeast   120 QLQQPFNNNIVLMKRAHSLSPSSSVSSSNSYQFQLNNDLKRLPIPSVNTSNYMVSRSLSGLPLTH 184

  Fly   247 -ETGLDSPCSTASSMSSLTPPATPYNVAPSNAKASAANNPSLLLRQLSEPVANAGDGYGVLLEAG 310
             :|..|.| ..:|.::|:     ||..||        ::||                      ..
Yeast   185 DKTARDLP-QLSSQLNSI-----PYYSAP--------HDPS----------------------TR 213

  Fly   311 REYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENINGYGGY----TGSRVSYPAYSYPANGGH 371
            ..|:.:.:...:..|.            .::.|:.:|......    |.:..:..|.|.|   |.
Yeast   214 HHYLNVAQAQPRANST------------PQLPFISSIINNSSQTPVTTTTTSTTTATSSP---GK 263

  Fly   372 FATE------EQQQQQALQASEALNYKPAAADIDPKEIDQY---------FMDQMLPMTQHHHPH 421
            |::.      |..:..::..|......|....:...::|||         ::.:.|..|:::...
Yeast   264 FSSSPNSSVLENNRLNSINNSNQYLPPPLLPSLQDFQLDQYQQLKQMGPTYIVKPLSHTRNNLLS 328

  Fly   422 HTHPLHHPLHHSPPLNSSASLSSACSSASSQ 452
            .|.|.||.:.|.|  |.:..|....:|::::
Yeast   329 TTTPTHHHIPHIP--NQNIPLHQIINSSNTE 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 26/75 (35%)
ROX1NP_015390.1 MATA_HMG-box 9..88 CDD:238685 29/79 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I2776
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 1 1.000 - - oto99344
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.810

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