DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and ABF2

DIOPT Version :10

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_013788.1 Gene:ABF2 / 855094 SGDID:S000004676 Length:183 Species:Saccharomyces cerevisiae


Alignment Length:122 Identity:33/122 - (27%)
Similarity:53/122 - (43%) Gaps:37/122 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 WNLVQASAKAP--TDRKKEHI----KRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKN 117
            :||.....||.  |..:.|.|    |||.:|:.::.|..|....|:.|.|:.:|:||..|:.|:|
Yeast    19 FNLASTLLKASKRTQLRNELIKQGPKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQN 83

  Fly   118 L-----------------------KDSDKK--------PFMEFAEKLRMTHKQEHPD 143
            |                       |:.|:|        ||:::|.::|.....:|||
Yeast    84 LEADIKEKYISERKKLYSEYQKAKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPD 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 27/103 (26%)
ABF2NP_013788.1 NHP6B 1..183 CDD:227935 33/122 (27%)

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