Protein Alignment Sox100B and HMGB6

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: NP_568431.1
• Gene: HMGB6 / 832408
• AraportID: AT5G23420
• Length: 241
• Species: Arabidopsis thaliana
• Alignment Length: 151
• Identity: 36/151 - (23%)
• Similarity: 58/151 - (38%)
• Gaps: 43/151 - (28%)

  Fly     5 SSSNCSKD-------RAKPVETLVLANYALKAEQKKAQGQGGRKEDERITTAVMKVLEGYDWNLV 62
            |..|||.|       .|:.|||...|. ...||:||....|.:.:
plant    54 SMHNCSLDAKIRVNLEAQVVETQAEAK-KKPAEKKKTTSDGPKPK-------------------- 97

  Fly    63 QASAKAPTDRKKEHI-----KRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKL----WKNL 118
              ..|...|.||...     |||:.||.::....|:....::    |..|:|...|:    ||:|
plant    98 --RLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEH----NGSLAKDAAKIGGEKWKSL 156

  Fly   119 KDSDKKPFMEFAEKLRMTHKQ 139
            .:.:||.:::.|.:|:..:.:
plant   157 TEEEKKVYLDKAAELKAEYNK 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	17/73 (23%)
HMGB6	NP_568431.1	HMG-box_AtHMGB1-like	116..175	CDD:438821	17/62 (27%)