Protein Alignment Sox100B and HMGB1

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: NP_974413.1
• Gene: HMGB1 / 824351
• AraportID: AT3G51880
• Length: 185
• Species: Arabidopsis thaliana
• Alignment Length: 124
• Identity: 32/124 - (25%)
• Similarity: 61/124 - (49%)
• Gaps: 15/124 - (12%)

  Fly    32 KKAQGQGGRKEDERITTAVMKVLEGYDWNLVQASAKAPTDR--------KKE--HIKRPMNAFMV 86
            |.|:|    |:..:.|...:|.::.......:|.|:.||.|        ||:  ..||..:||.|
plant     2 KTAKG----KDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFV 62

  Fly    87 WAQAARRVMSKQYPHLQN-SELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDY 144
            :.:..|....|:.|:::. |.:.|:.|:.||::..::|.|:.|.|.|.:..::::...|
plant    63 FLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAY 121

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	19/70 (27%)
HMGB1	NP_974413.1	PRK05901	1..>171	CDD:235640	32/124 (26%)
		HMG-box_AtHMGB1-like	54..114	CDD:438821	18/59 (31%)