DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sox100B and SRY

DIOPT Version :9

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_003131.1 Gene:SRY / 6736 HGNCID:11311 Length:204 Species:Homo sapiens


Alignment Length:88 Identity:42/88 - (47%)
Similarity:67/88 - (76%) Gaps:1/88 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 KEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHK 138
            ::.:|||||||:||::..||.|:.:.|.::|||:||.||..||.|.:::|.||.:.|:||:..|:
Human    57 QDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHR 121

  Fly   139 QEHPDYKYQPRRKKARVLPSQQS 161
            :::|:|||:||| ||::||...|
Human   122 EKYPNYKYRPRR-KAKMLPKNCS 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 32/69 (46%)
SRYNP_003131.1 Sufficient for interaction with KPNB1. /evidence=ECO:0000269|PubMed:15297880 59..136 38/77 (49%)
SOX-TCF_HMG-box 59..130 CDD:238684 33/70 (47%)
Required for nuclear localization. /evidence=ECO:0000269|PubMed:12764225, ECO:0000269|PubMed:15746192 61..77 10/15 (67%)
Sufficient for interaction with EP300. /evidence=ECO:0000269|PubMed:15297880 107..139 15/32 (47%)
Required for nuclear localization. /evidence=ECO:0000269|PubMed:15297880 130..136 4/6 (67%)
Necessary for interaction with ZNF208 isoform KRAB-O. /evidence=ECO:0000269|PubMed:15469996 138..155 3/6 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..204
Necessary for interaction with SLC9A3R2. /evidence=ECO:0000269|PubMed:9054412 198..204
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148470
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.