Protein Alignment Sox100B and Hmg20a

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: NP_080088.1
• Gene: Hmg20a / 66867
• MGIID: 1914117
• Length: 346
• Species: Mus musculus
• Alignment Length: 139
• Identity: 29/139 - (20%)
• Similarity: 61/139 - (43%)
• Gaps: 11/139 - (7%)

  Fly    27 LKAEQKKA-QGQGGRKEDERITTAVMKVLEGYDWNLVQASAKAPTDRKKEHIKRPMNAFMVWAQA 90
            |::|...| :|...|.|||:      :...| .|:..:...|...|....  |.|:..::.:...
Mouse    60 LQSEASNAVEGNEQRPEDEQ------RSKRG-GWSKGRKRKKPLRDSNAP--KSPLTGYVRFMNE 115

  Fly    91 ARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDY-KYQPRRKKAR 154
            .|..:..:.|.:...|:::.||..|..|...:|:.:::.|::.:..:.:|...| |.:..:..:|
Mouse   116 RREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFSR 180

  Fly   155 VLPSQQSGE 163
            ....:|.|:
Mouse   181 KTQDRQKGK 189

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	14/74 (19%)
Hmg20a	NP_080088.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..112		14/60 (23%)
		DUF5401	<76..312	CDD:375164	24/123 (20%)
		HMG-box_HMG20A	82..185	CDD:438833	19/105 (18%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	178..210		3/12 (25%)