DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and SOX11

DIOPT Version :9

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_003099.1 Gene:SOX11 / 6664 HGNCID:11191 Length:441 Species:Homo sapiens


Alignment Length:455 Identity:129/455 - (28%)
Similarity:178/455 - (39%) Gaps:156/455 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 HIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQE 140
            ||||||||||||::..||.:.:|.|.:.|:|:||.|||.||.||||:|.||:..||:||:.|..:
Human    48 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMAD 112

  Fly   141 HPDYKYQPRRKKARVLPSQQSGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGS 205
            :|||||:||:|                 |:|..||...:|..|..|.:.|    |.|:|....| 
Human   113 YPDYKYRPRKK-----------------PKMDPSAKPSASQSPEKSAAGG----GGGSAGGGAG- 155

  Fly   206 CASTISHANVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPY 270
                      |:.:|         |..:..|..           |.:|                 
Human   156 ----------GAKTS---------KGSSKKCGK-----------LKAP----------------- 173

  Fly   271 NVAPSNAKASAANNPSLLLRQLSEPVANAGDGYGVLLEAGREYVAIGEVNYQGQSAGVQSGAEGG 335
              |.:.|||.|..            .|.:|| ||   .||.:|| :|.:..        ||:.||
Human   174 --AAAGAKAGAGK------------AAQSGD-YG---GAGDDYV-LGSLRV--------SGSGGG 211

  Fly   336 GAGQEMD--FLENINGYGGYTGSRVSYPAYSYPANGGHFATEEQQQQQAL-----QASEAL-NYK 392
            |||:.:.  ||:. :.........:.......|..    ..||...||.|     |.|:.| .|.
Human   212 GAGKTVKCVFLDE-DDDDDDDDDELQLQIKQEPDE----EDEEPPHQQLLQPPGQQPSQLLRRYN 271

  Fly   393 ----PAAADI-----DPKEIDQYFMDQMLP------------------MTQHHHPHHTHPLHHPL 430
                ||:..:     .|:....|  |::..                  :|:.|.|    ||..|.
Human   272 VAKVPASPTLSSSAESPEGASLY--DEVRAGATSGAGGGSRLYYSFKNITKQHPP----PLAQPA 330

  Fly   431 HHSPPLNSSASLSSACSSASSQQPVAE------YYEHLGYSPAASSASQNPNFGPQQPYANGAAS 489
             .||..:.|.|.||:.||.||.....|      :...|.:|.:|.|||       :|....|||:
Human   331 -LSPASSRSVSTSSSSSSGSSSGSSGEDADDLMFDLSLNFSQSAHSAS-------EQQLGGGAAA 387

  Fly   490  489
            Human   388  387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 40/69 (58%)
SOX11NP_003099.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
SOX-TCF_HMG-box 48..119 CDD:238684 41/70 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..216 46/195 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..292 13/55 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..359 17/44 (39%)
Required for transcriptional activation activity and synergistic coactivation of transcriptional activity with POU3F2. /evidence=ECO:0000250|UniProtKB:Q7M6Y2 409..441
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.810

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