Protein Alignment Sox100B and sox1b

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: NP_001032751.1
• Gene: sox1b / 562710
• ZFINID: ZDB-GENE-060322-5
• Length: 340
• Species: Danio rerio
• Alignment Length: 488
• Identity: 110/488 - (22%)
• Similarity: 164/488 - (33%)
• Gaps: 220/488 - (45%)

  Fly    64 ASAKAPTDRKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFME 128
            :.:|...||    :||||||||||::..||.|:::.|.:.|||:||.||..||.:.:::|:||::
Zfish    28 SGSKVNQDR----VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFID 88

  Fly   129 FAEKLRMTHKQEHPDYKYQPRRKKARVLPSQQ--------SGEGGSPGPEMTLSATMGSSGKPRS 185
            .|::||..|.:|||||||:||||...:|...:        :|.||..|    :...||::|.
Zfish    89 EAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLAGGLLAGSGGGGG----VGLGMGAAGV--- 146

  Fly   186 SNSNGQR---RAGKGNAAADLGSCASTISHANVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIE 247
                |||   ..|.|      ||.|::.:|.|       .::|.|:...:.:|.||:.|.|
Zfish   147 ----GQRLESPVGHG------GSTAASYAHMN-------GWTNGAYSGQVAAAAAAAAMMQ---- 190

  Fly   248 TGLDSPCSTASSMSSLTPPATPYNVAPSNAKASAANNPSLLLRQLSEPVANAGDGYGVLLEAGRE 312
                                                                             
Zfish   191 ----------------------------------------------------------------- 190

  Fly   313 YVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENINGYGGYTGSRVSYPAYSYPANGGHFATEEQ 377
                     :.|.|                       ||.:.||...:       :.||
Zfish   191 ---------EAQLA-----------------------YGQHPGSGAHH-------HHGH------ 210

  Fly   378 QQQQALQASEALNYKPAAADIDPKEIDQYFMDQMLPMTQHHHPHHTHPLHH----PLHHSPPLNS 438
                                                   |||||:..|:|.    .|.:||..||
Zfish   211 ---------------------------------------HHHPHNPQPMHRYEMTALQYSPLSNS 236

  Fly   439 SASLSSACSSASSQQPVAEYYEHLGYSPAASSA--------SQNPNFGP------QQPYANGAAS 489
            .:.:|::.|....    ..|.:|...|.|:|.|        ...|:..|      :.|.:.....
Zfish   237 QSYMSASPSGYGG----ISYTQHQNSSVASSGAIGALGSLVKSEPSVSPPVNAHSRAPCSGDLRE 297

  Fly   490 M------TPTLGDPAPQQELQSQQQEQQHQNPS 516
            |      |...|||:.|..|.:..|..|....|
Zfish   298 MISMYLPTAEAGDPSVQSRLHAVPQHYQSSTTS 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	38/73 (52%)
sox1b	NP_001032751.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..35		1/6 (17%)
		HMG-box_SoxB	35..114	CDD:438790	43/82 (52%)
		SOXp	106..>198	CDD:463537	33/216 (15%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	198..219		9/72 (13%)
		9aaTAD. /evidence=ECO:0000250|UniProtKB:P41225	297..305		1/7 (14%)