DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and sox12

DIOPT Version :10

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001025449.3 Gene:sox12 / 562381 ZFINID:ZDB-GENE-040724-33 Length:369 Species:Danio rerio


Alignment Length:311 Identity:89/311 - (28%)
Similarity:132/311 - (42%) Gaps:106/311 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KAPTDRKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAE 131
            |.||.    ||||||||||||:|..||.:.:|:|.:.|:|:||.|||.||.|.|.:|.||::.||
Zfish    61 KTPTG----HIKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEAE 121

  Fly   132 KLRMTHKQEHPDYKYQPRRKKARVLPSQQSGEGGSP---GPEMTLSATMGSSGKPRSSNSNGQRR 193
            :||:.|..::|||||:||:|          .:|.:|   |.::.:     .|.||....|:|.  
Zfish   122 RLRLKHMADYPDYKYRPRKK----------SKGSTPVKLGEKLPM-----KSSKPLPGRSSGL-- 169

  Fly   194 AGKGNAAADLGSC-------ASTISHANVGSNS----SDVFSNEAFMK-SLNS------------ 234
                       ||       ||:....|..||.    |:..|::..|. :|.|            
Zfish   170 -----------SCKGLKIKPASSKHKMNFSSNKYKSYSESMSDDDTMDVNLESPVTQQDDRNTSS 223

  Fly   235 -------ACAASLMEQSLIETGLDSPCSTASSMSSLTP----------------------PATPY 270
                   |...|..:|.:.|..:..|.|..||:.||:.                      .:||.
Zfish   224 HFVLHQQATVQSEDQQPIPELRVKVPISQTSSIQSLSSDSECQAFPESTTSEPRGSTSGRSSTPT 288

  Fly   271 NVAPSNAKASAANNPSL---LLRQLSEPV---------------ANAGDGY 303
            :.:.|:..:||.::..|   ||..:|..:               ||:|..:
Zfish   289 STSSSSLVSSACSDEELDEELLHIISNSMPMDCSALDKDFEAFNANSGSHF 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 42/73 (58%)
sox12NP_001025449.3 None

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