DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and sox14

DIOPT Version :9

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001032769.1 Gene:sox14 / 557661 ZFINID:ZDB-GENE-051113-268 Length:238 Species:Danio rerio


Alignment Length:237 Identity:86/237 - (36%)
Similarity:119/237 - (50%) Gaps:49/237 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 EHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQ 139
            :||||||||||||::..||.|:::.|.:.|||:||.||..||.|.:|:|:|:::.|::||..|.:
Zfish     6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMK 70

  Fly   140 EHPDYKYQPRRKKARVL-------PSQQSGE----GGSPGPEMTLSAT---MGSSGKPRS----- 185
            |||||||:||||...:|       |....|:    .|.|     :|||   :|||.|.|:     
Zfish    71 EHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDHLKGLP-----VSATDSLLGSSEKARAFLPPT 130

  Fly   186 ------------SNSNGQRRAGKGNAAADLGSCASTISHANVGSNSSDVFSNEAFMKSLNSACAA 238
                        |:|..|:.....:..|     .||:.:|     ||..:.|.|| .||......
Zfish   131 SAPYSFLDPSQFSSSAIQKMTEMPHTLA-----TSTLPYA-----SSLGYQNGAF-GSLGCPSQH 184

  Fly   239 SLMEQSLIETGLDSPCS-TASSMSSLTPPATPYNVAPSNAKA 279
            :....|....|...||: ||.|.|||.||.. |.:.|...|:
Zfish   185 THTHPSPTNPGYVVPCNCTAWSASSLQPPVA-YILFPGMTKS 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 38/69 (55%)
sox14NP_001032769.1 SOX-TCF_HMG-box 7..78 CDD:238684 39/70 (56%)
SOXp 77..>95 CDD:289133 6/17 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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