DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and Sox21b

DIOPT Version :10

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:XP_061509694.1 Gene:Sox21b / 4577582 VectorBaseID:AGAMI1_014325 Length:529 Species:Anopheles gambiae


Alignment Length:556 Identity:132/556 - (23%)
Similarity:199/556 - (35%) Gaps:201/556 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSSSSNCSKDRAKPVETLVLANYALKAEQKKAQGQGGRKEDERITTAVMKVLEGYDWN--LVQ 63
            :|..:|.:.|...:..:.:|.|.:..|.|....|.   ...:...:...|..:|.|...|  |.|
Mosquito    70 LSIPTSQSLSNQSSHALNSLGLHSQNLHASSVNAL---HNSQTTNLHQNVSGLLNGAAGNGLLGQ 131

  Fly    64 ASAKAPTDRKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFME 128
            |..|.|.:   |||||||||||||::..||.:::..|.:.|||:||.||..||.|.:.:|:||::
Mosquito   132 AMLKKPAE---EHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEDEKRPFID 193

  Fly   129 FAEKLRMTHKQEHPDYKYQPRRK-----------------------KARVLPSQQSGEGGSPGPE 170
            .|::||..|.:|||||||:||||                       :|.:.||.     .:||..
Mosquito   194 EAKRLRAMHMKEHPDYKYRPRRKPKPIRRDGYPYPMTYPSVPVDALRAGITPSY-----FAPGAP 253

  Fly   171 MTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGSCASTISHANVGSNSSDVFSNEAFMKS--LN 233
            ..|.:.:..:..|.:.:|.                           |:..|| |..|..:|  ||
Mosquito   254 YHLGSHLSQASPPTTQSSI---------------------------SSQMDV-SKFALDRSAYLN 290

  Fly   234 SACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPYNVAPSNAKASAANNPSLLLRQLSEPVAN 298
            :|.|.:|.:.:..:|   :|.|.....:|:...|. ::......:|.||.|.:..:.::      
Mosquito   291 TAAAGALYDTAKSQT---NPYSAYLDPTSVLTKAY-FDSKMYQDRAQAAANYAFDISKI------ 345

  Fly   299 AGDGYGVLLEAGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENINGYGGYTGSRVSYPAY 363
                ||...:            .|.|..|..|....|.:.|:....::                 
Mosquito   346 ----YGTTAQ------------QQQQQLGSSSSTSSGSSSQQQQQQQH----------------- 377

  Fly   364 SYPANGGHFATEEQQQQQALQASEALNYKPAAADIDPKEIDQYFMDQMLPMTQHHHPHHTHPLHH 428
                       ::|||||..|..:                 |:...|:     ...|||   |||
Mosquito   378 -----------QQQQQQQQHQQHQ-----------------QHQQHQL-----QQSPHH---LHH 406

  Fly   429 PLHHSPPLNSSASLSSACSSASSQQPVAEYYEHLGYSPAASSASQNPNFGPQQPYANGAAS---- 489
            ||||                                               |....|||||    
Mosquito   407 PLHH-----------------------------------------------QHQLQNGAASGGLD 424

  Fly   490 ---MTPTLGDPAPQQELQSQQQEQQHQNPSQHHLWG 522
               .||.|||..|  :::.|..|....:|...|.:|
Mosquito   425 ERESTPQLGDVTP--DIKPQIVEPLEGSPLHSHSYG 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 40/73 (55%)
Sox21bXP_061509694.1 None

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