DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and sox8b

DIOPT Version :10

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001020636.3 Gene:sox8b / 386704 ZFINID:ZDB-GENE-031114-1 Length:356 Species:Danio rerio


Alignment Length:490 Identity:134/490 - (27%)
Similarity:166/490 - (33%) Gaps:217/490 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GQGGRKEDER----ITTAVMKVLEGYDWNLVQASAK-APTDRKKEHIKRPMNAFMVWAQAARRVM 95
            ||....||.|    |..||.:||:||||:||....: :.:.:.|.|:||||||||||||||||.:
Zfish    40 GQQAEDEDGRFPVCIRDAVSQVLKGYDWSLVPMPVRVSGSGKSKPHVKRPMNAFMVWAQAARRKL 104

  Fly    96 SKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVLPSQQ 160
            :.|||||.|:||||:|||||:.|.:|:|:||:|.||:||:.||::||||||||||:| ||.|...
Zfish   105 ADQYPHLHNAELSKTLGKLWRLLTESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK-RVEPGHA 168

  Fly   161 SGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGSCASTISHANVGSNSSDVFSN 225
            ..|.||...:....|..|..           |..|..:...|                       
Zfish   169 ESEAGSELMQHMYKAEPGMG-----------RLTGSPDHITD----------------------- 199

  Fly   226 EAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPYNVAPSNAKASAANNPSLLLR 290
                                         .|.......|||.||....|...|            
Zfish   200 -----------------------------HTGHPHGPPTPPTTPKTEHPQGPK------------ 223

  Fly   291 QLSEPVANAGDGYGVLLEAGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENINGYGGYTG 355
                                                            |.:||            
Zfish   224 ------------------------------------------------QNIDF------------ 228

  Fly   356 SRVSYPAYSYPANGGHFATEEQQQQQALQASEALNYKPAAADIDPKEIDQYFMDQMLPMT----- 415
            |.|.....|....|.                         ...|.:|.|||     ||:|     
Zfish   229 SNVDISELSTDVIGN-------------------------MTFDLQEFDQY-----LPLTPDQGA 263

  Fly   416 ---------QHHHPHHTH-------PLHHPLHHSPPLNSSASLSSACSSASSQQPVAEYYEHLGY 464
                     .|.||...|       |.|:..|           ||...|:||.|  .||.||..|
Zfish   264 CSRRAPPAGAHLHPQRVHIKTEQRSPQHYSEH-----------SSTLYSSSSAQ--CEYTEHSFY 315

  Fly   465 SPAASSASQNPNFGPQQPYANGAASMTPTLGDPAP 499
            ||.:|       :....||.:     .|.|..|||
Zfish   316 SPYSS-------YPYPYPYLH-----RPILNIPAP 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 52/73 (71%)
sox8bNP_001020636.3 None

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