DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and sox8b

DIOPT Version :9

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001020636.1 Gene:sox8b / 386704 ZFINID:ZDB-GENE-031114-1 Length:358 Species:Danio rerio


Alignment Length:490 Identity:134/490 - (27%)
Similarity:169/490 - (34%) Gaps:215/490 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GQGGRKEDER----ITTAVMKVLEGYDWNLVQASAK-APTDRKKEHIKRPMNAFMVWAQAARRVM 95
            ||....||.|    |..||.:||:||||:||....: :.:.:.|.|:||||||||||||||||.:
Zfish    40 GQQAEDEDGRFPVCIRDAVSQVLKGYDWSLVPMPVRVSGSGKSKPHVKRPMNAFMVWAQAARRKL 104

  Fly    96 SKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVLPSQQ 160
            :.|||||.|:||||:|||||:.|.:|:|:||:|.||:||:.||::||||||||||:|: |.|...
Zfish   105 ADQYPHLHNAELSKTLGKLWRLLTESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS-VKPGHA 168

  Fly   161 SGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGSCASTISHANVGSNSSDVFSN 225
            ..|.||...:....|..|..           |..|..:...|                       
Zfish   169 ESEAGSELMQHMYKAEPGMG-----------RLTGSPDHITD----------------------- 199

  Fly   226 EAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPYNVAPSNAKASAANNPSLLLR 290
                                         .|..:....|||.||....|...|            
Zfish   200 -----------------------------HTGHTHGPPTPPTTPKTEHPQAPK------------ 223

  Fly   291 QLSEPVANAGDGYGVLLEAGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENINGYGGYTG 355
                                                            |.:||            
Zfish   224 ------------------------------------------------QNIDF------------ 228

  Fly   356 SRVSYPAYSYPANGGHFATEEQQQQQALQASEALNYKPAAADIDPKEIDQYFMDQMLPMT----- 415
            |.|.....|....|.                         ...|.:|.|||     ||:|     
Zfish   229 SNVDISELSTDVIGN-------------------------LTFDLQEFDQY-----LPLTPDQGA 263

  Fly   416 ---------QHHHPHHTH-------PLHHPLHHSPPLNSSASLSSACSSASSQQPVAEYYEHLGY 464
                     .|.||...|       |.|:. .||..|.||:|.|:.|          ||.||..|
Zfish   264 CSRRAPPAGAHLHPQRVHIKTEQRSPQHYS-EHSSTLYSSSSSSAQC----------EYTEHSFY 317

  Fly   465 SPAASSASQNPNFGPQQPYANGAASMTPTLGDPAP 499
            ||.:|       :....||.:     .|.|..|||
Zfish   318 SPYSS-------YPYPYPYLH-----RPILNIPAP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 48/69 (70%)
sox8bNP_001020636.1 Sox_N 1..75 CDD:289229 16/34 (47%)
SOX-TCF_HMG-box 85..155 CDD:238684 48/69 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6177
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 184 1.000 Inparanoid score I3937
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 1 1.000 - - otm24602
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45803
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5318
SonicParanoid 1 1.000 - - X1210
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.990

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