Protein Alignment Sox100B and Hmg-2

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Alignment Length: 272
• Identity: 58/272 - (21%)
• Similarity: 88/272 - (32%)
• Gaps: 94/272 - (34%)

  Fly    31 QKKAQGQGGRKEDERITTAVMKVLEGYDWNLVQAS---AKAPTDRKKEHIKRPMNAFMVWAQAAR 92
            :|||:...||..|..|.:.:.|        |.|..   |.||        |.|:|.::.:....|
  Fly    43 KKKAKNPKGRHSDSDIGSELKK--------LAQRRINVAGAP--------KMPLNGYVRFMNDRR 91

  Fly    93 RVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFME--------FAEKLRMTHKQEHPDY--KYQ 147
            ..:.::.|.....|.::.:|:.|..|.:..|.|::|        :.|:|:|..| |||:.  ...
  Fly    92 EELRREQPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLK-EHPEIVANEL 155

  Fly   148 PRRKKARVLPSQQSGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGSCASTISH 212
            .:.|||..|                       .|.|:.....|:...||.....
  Fly   156 AKAKKATKL-----------------------DGSPKEKTPKGESALGKAKKTK----------- 186

  Fly   213 ANVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCS---TASSMSSLTPPATPYNVAP 274
                                    |..:..||  |...|.|.:   .|.:....||||.|....|
  Fly   187 ------------------------AKPVKRQS--EDPDDVPLAKVKRAQTPPPPTPPAAPVQPPP 225

  Fly   275 SNA-KASAANNP 285
            |:. .|:.|..|
  Fly   226 SSVPPATPAPRP 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	19/83 (23%)
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	21/87 (24%)