Sequence 1: | NP_651839.1 | Gene: | Sox100B / 45039 | FlyBaseID: | FBgn0024288 | Length: | 529 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001019952.1 | Gene: | Sox18 / 311723 | RGDID: | 1311718 | Length: | 377 | Species: | Rattus norvegicus |
Alignment Length: | 397 | Identity: | 113/397 - (28%) |
---|---|---|---|
Similarity: | 155/397 - (39%) | Gaps: | 118/397 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 77 IKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEH 141
Fly 142 PDYKYQPRRKK-ARVLPSQQSGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGS 205
Fly 206 CASTISHANVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPY 270
Fly 271 NVAPSNAKA----SAANNPSLLLRQLSEPVANAGDGYG-VLLEAGREYVAIGEVNYQGQSAGVQS 330
Fly 331 GAEGGGAGQEMDFLENINGYGGYTGSRVSYPAYSYPANGGHFATEEQQQQQALQASEALNYKPAA 395
Fly 396 ---ADIDPKEIDQYFMDQMLPMTQHHHPHHTH-PLHHPLHHSPPLNSS----ASLSSACSSASSQ 452
Fly 453 QPVAEYY 459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox100B | NP_651839.1 | SOX-TCF_HMG-box | 76..146 | CDD:238684 | 37/68 (54%) |
Sox18 | NP_001019952.1 | SOX-TCF_HMG-box | 78..149 | CDD:238684 | 38/69 (55%) |
Sox17_18_mid | 191..239 | CDD:403331 | 11/67 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |