Protein Alignment Sox100B and Sox7

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: NP_001099515.1
• Gene: Sox7 / 290317
• RGDID: 1310038
• Length: 383
• Species: Rattus norvegicus
• Alignment Length: 517
• Identity: 115/517 - (22%)
• Similarity: 154/517 - (29%)
• Gaps: 235/517 - (45%)

  Fly    53 VLEGYDW---------------NLVQASAKAPTDRK--KEHIKRPMNAFMVWAQAARRVMSKQYP 100
            :|..|.|               .|...:...|:..|  :..|:||||||||||:..|:.::.|.|
  Rat     4 LLGAYPWTEGLECPALEAELSDGLSPPAVPRPSGDKGSESRIRRPMNAFMVWAKDERKRLAVQNP 68

  Fly   101 HLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVLPSQQSGEGG 165
            .|.|:||||.|||.||.|..|.|:|:::.||:||:.|.|::|:|||:|||||
  Rat    69 DLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK------------- 120

  Fly   166 SPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGSCASTISHANVGSNSSDVFSNEAFMK 230
                                   .|:|...:    .|.|...|::|.
  Rat   121 -----------------------QGKRLCKR----VDPGFLLSSLSR------------------ 140

  Fly   231 SLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPYNVAPSNAKASAANNPSLLLRQLSEP 295
                                                  ..|..|.  |.|....|
  Rat   141 --------------------------------------DQNTLPE--KNSIGRGP---------- 155

  Fly   296 VANAGDGYGVLLEAGREYVAIGEVNYQGQSA------GVQSGAEGGGAGQEMDFLENINGYGGYT 354
                                :||...:|:.|      |:.|....|.|..              .
  Rat   156 --------------------LGEKEDRGEYAPGATLPGLHSCYREGAAAA--------------P 186

  Fly   355 GSRVSYPAYSYPANGGHFATEEQQQQQALQASEALNYKPAAADIDPKEIDQYFMDQMLPMTQHHH 419
            ||..:|| |..|.                        .|..:.:|..|.:|.|..... ..:|.|
  Rat   187 GSVDTYP-YGLPT------------------------PPEMSPLDALEPEQTFFSSSC-QEEHGH 225

  Fly   420 PHHTHPLHH-------------PLHHSPPLNSSASLS----SACSSASSQQPVAEYYEHLGYSPA 467
            |||   |.|             |||.|.||.|.|...    |..||.....|...||.|..|.|.
  Rat   226 PHH---LPHLPGPPYSPEFTPSPLHCSHPLGSLALGQSPGVSMMSSVPGCPPSPAYYSHATYHPL 287

  Fly   468 ASSASQNPNF---------GPQQPYAN--GAASMTPTLGDPAPQQELQSQQQEQQHQNPSQH 518
                  :||.         .|:.|..:  ...|....|||       ..:.:..|:.|...|
  Rat   288 ------HPNLQAHLGQLSPPPEHPGFDTLDQLSQVELLGD-------MDRNEFDQYLNTPGH 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	40/73 (55%)
Sox7	NP_001099515.1	HMG-box_SoxF_SOX7	34..121	CDD:438849	46/122 (38%)
		Sox17_18_mid	178..222	CDD:463454	13/83 (16%)