DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and Meiosin

DIOPT Version :9

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001357740.1 Gene:Meiosin / 243866 MGIID:3647482 Length:589 Species:Mus musculus


Alignment Length:560 Identity:109/560 - (19%)
Similarity:171/560 - (30%) Gaps:209/560 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QASAKAPTDR--KKEHIKRPMNAFMVWAQAARRVMSKQY-------------PHLQ-NSELSKSL 111
            :|.:.:||||  ||.|..: :....:......:...|:|             .:|| |.:::|:|
Mouse    15 RARSPSPTDRKDKKNHTNK-LRELALLIPVTMKTRDKKYTKKEILLRVLHYIQYLQRNIDMTKAL 78

  Fly   112 GKLWK-----------------------NLKDSDKKPFM----EFAEKLRMTHKQEHPDYKYQPR 149
            .||..                       :...|.:||.:    ....|.:.|...|||.:.|.||
Mouse    79 LKLHSSNGKGRFVGPGLNPSAGQTQQQHSTPSSSQKPSLWSTSSKPRKKKFTRVSEHPSWPYNPR 143

  Fly   150 RKKA--------RVLP--SQQSGEGGS-PGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADL 203
            |..|        .:.|  .:::.|..: ||   .||.:...:.:|..|..:||   |......|:
Mouse   144 RSLALDQAENPNTIHPGLKEENEECATYPG---VLSPSTYPTTEPSVSEGDGQ---GAQLVFLDM 202

  Fly   204 GSCASTI-------SHA---NVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTAS 258
               |..|       .||   ..|..::|:....:|..:....|.:|..::..:       | |:|
Mouse   203 ---AQNIFAYDILSDHAVEVQGGEPNADIKVQRSFFLTRAQPCVSSCRQKLFL-------C-TSS 256

  Fly   259 SMSSLTPPATPYNVAPSNAKASAANNPSLLLRQLSEPVANAGDGYGVLLEAGREYVAIGEVNYQG 323
            ......|.:.|:  .|......:.|...|.|                                  
Mouse   257 EADKEAPDSDPW--LPVWTSEDSPNGSPLAL---------------------------------- 285

  Fly   324 QSAGVQSGAEGGGAGQEMDFLENINGYGGYTGSRVSYPAYSYP----ANGGHFATEEQQQQQALQ 384
                   |:.........|:|..|.   |.:.|..|.|:...|    .:|.:|.||         
Mouse   286 -------GSSQINTWHVADYLNEIL---GVSSSLFSSPSKILPDHVLEDGTYFLTE--------- 331

  Fly   385 ASEALNYKPAAADID-PKEIDQYFMDQMLPMTQHHHPHHTHPLHHPLHHSPPLNSSASLS----- 443
              ..|...||..::: |:|.:          .....|  |.|        |...||.||.     
Mouse   332 --GLLESSPATCEVESPQEKE----------VSSEGP--TGP--------PNFQSSVSLDHCYLS 374

  Fly   444 --------SACSSASSQ------------QPVAEYYEHLG-YSPAASSASQNPNFGPQ------- 480
                    |.|.|:|..            :.||.|....| :|.|..|..|..|  |:       
Mouse   375 LSENVKVLSNCGSSSESTDTESLWGQEEVRGVATYPRRTGVFSLAQPSVLQQAN--PEGLQTSSD 437

  Fly   481 --QPYANGAASMTPT---LGDPAPQQELQSQQQEQQHQNP 515
              :.|     :.|||   .|.|...::::..|..|....|
Mouse   438 EDRDY-----TWTPTGQSSGLPVASKKIKKVQASQGPVKP 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 18/110 (16%)
MeiosinNP_001357740.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 7/15 (47%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 14..27 5/11 (45%)
bHLH_SF 24..73 CDD:412148 9/49 (18%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 28..68 4/40 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..191 21/104 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..363 6/40 (15%)
NHP6B 416..>539 CDD:227935 15/64 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..457 10/41 (24%)
HMG-box 484..539 CDD:238037
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 544..566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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