DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and Meiosin

DIOPT Version :10

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001357740.1 Gene:Meiosin / 243866 MGIID:3647482 Length:589 Species:Mus musculus


Alignment Length:560 Identity:109/560 - (19%)
Similarity:171/560 - (30%) Gaps:209/560 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 QASAKAPTDR--KKEHIKRPMNAFMVWAQAARRVMSKQY-------------PHLQ-NSELSKSL 111
            :|.:.:||||  ||.|..: :....:......:...|:|             .:|| |.:::|:|
Mouse    15 RARSPSPTDRKDKKNHTNK-LRELALLIPVTMKTRDKKYTKKEILLRVLHYIQYLQRNIDMTKAL 78

  Fly   112 GKLWK-----------------------NLKDSDKKPFM----EFAEKLRMTHKQEHPDYKYQPR 149
            .||..                       :...|.:||.:    ....|.:.|...|||.:.|.||
Mouse    79 LKLHSSNGKGRFVGPGLNPSAGQTQQQHSTPSSSQKPSLWSTSSKPRKKKFTRVSEHPSWPYNPR 143

  Fly   150 RKKA--------RVLP--SQQSGEGGS-PGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADL 203
            |..|        .:.|  .:::.|..: ||   .||.:...:.:|..|..:||   |......|:
Mouse   144 RSLALDQAENPNTIHPGLKEENEECATYPG---VLSPSTYPTTEPSVSEGDGQ---GAQLVFLDM 202

  Fly   204 GSCASTI-------SHA---NVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTAS 258
               |..|       .||   ..|..::|:....:|..:....|.:|..::..:       | |:|
Mouse   203 ---AQNIFAYDILSDHAVEVQGGEPNADIKVQRSFFLTRAQPCVSSCRQKLFL-------C-TSS 256

  Fly   259 SMSSLTPPATPYNVAPSNAKASAANNPSLLLRQLSEPVANAGDGYGVLLEAGREYVAIGEVNYQG 323
            ......|.:.|:  .|......:.|...|.|                                  
Mouse   257 EADKEAPDSDPW--LPVWTSEDSPNGSPLAL---------------------------------- 285

  Fly   324 QSAGVQSGAEGGGAGQEMDFLENINGYGGYTGSRVSYPAYSYP----ANGGHFATEEQQQQQALQ 384
                   |:.........|:|..|.   |.:.|..|.|:...|    .:|.:|.||         
Mouse   286 -------GSSQINTWHVADYLNEIL---GVSSSLFSSPSKILPDHVLEDGTYFLTE--------- 331

  Fly   385 ASEALNYKPAAADID-PKEIDQYFMDQMLPMTQHHHPHHTHPLHHPLHHSPPLNSSASLS----- 443
              ..|...||..::: |:|.:          .....|  |.|        |...||.||.     
Mouse   332 --GLLESSPATCEVESPQEKE----------VSSEGP--TGP--------PNFQSSVSLDHCYLS 374

  Fly   444 --------SACSSASSQ------------QPVAEYYEHLG-YSPAASSASQNPNFGPQ------- 480
                    |.|.|:|..            :.||.|....| :|.|..|..|..|  |:       
Mouse   375 LSENVKVLSNCGSSSESTDTESLWGQEEVRGVATYPRRTGVFSLAQPSVLQQAN--PEGLQTSSD 437

  Fly   481 --QPYANGAASMTPT---LGDPAPQQELQSQQQEQQHQNP 515
              :.|     :.|||   .|.|...::::..|..|....|
Mouse   438 EDRDY-----TWTPTGQSSGLPVASKKIKKVQASQGPVKP 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 20/114 (18%)
MeiosinNP_001357740.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 7/15 (47%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 14..27 5/11 (45%)
bHLH_SF 24..73 CDD:469605 9/49 (18%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 28..68 4/40 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..191 21/104 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..363 6/40 (15%)
NHP6B 416..>539 CDD:227935 15/64 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..457 10/41 (24%)
HMG-box_BHMG1 484..549 CDD:438793
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 544..566
Blue background indicates that the domain is not in the aligned region.

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