DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and Sox30

DIOPT Version :9

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_775560.1 Gene:Sox30 / 214105 MGIID:1341157 Length:782 Species:Mus musculus


Alignment Length:440 Identity:105/440 - (23%)
Similarity:154/440 - (35%) Gaps:117/440 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 HIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQE 140
            |:|||||||||||:..|..::|..|...|:|:|..||..|..|.:..|||:.:.|:|::..|::|
Mouse   365 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREE 429

  Fly   141 HPDYKYQPRRKKARVLPSQQSGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGS 205
            .|.:.||||..|.:..|...|..  ..|....:.:|..::..|..|.:......|..|       
Mouse   430 FPGWVYQPRPGKRKRFPLSVSNV--FSGTTQNIISTNPTTIYPYRSPTYSVVIPGLQN------- 485

  Fly   206 CASTISHANVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATPY 270
               ||:|. ||.....:   :....::......:|.:.|:..||     ..|....||||     
Mouse   486 ---TITHP-VGEAPPAI---QLPTPAVQRPSPITLFQPSVSSTG-----PVAVPPPSLTP----- 533

  Fly   271 NVAPSNAKASAANNPSLLLRQLSEPVANAGDGYGVLLEAGREYVAIGEVNY--QGQSAGVQSGAE 333
                         .|||..::.|.|...                   :::.  .|.|..|:....
Mouse   534 -------------RPSLPPQRFSGPSQT-------------------DIHRLPSGSSRSVKRSTP 566

  Fly   334 GGGAGQEMDFLENINGYGGYTGSRVSYPAYSYPANGGHFATEEQQQQQALQASEALNYKPAAADI 398
            |.        ||          |....||.:..|: ..|||...|                    
Mouse   567 GS--------LE----------STTRIPAGASTAH-ARFATSPIQ-------------------- 592

  Fly   399 DPKEIDQYFMDQMLPMTQHHHPHHTHPLHHPLHHSPPLNSSASLSSACSSASSQQPVAEYYEHLG 463
            .|||   |......|.:....|....| |..::..|||...|:|.......|...|......|  
Mouse   593 PPKE---YASVSTCPRSTPIPPATPIP-HSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPH-- 651

  Fly   464 YSPAASSASQNPNFGPQQPYANGAASMTPTLGDPAPQQELQSQQQEQQHQ 513
            |.|:::.....|.||    |.|..:||...||        ..:.:.|:|:
Mouse   652 YFPSSTCPYSRPPFG----YGNFPSSMPECLG--------YYEDRYQKHE 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 30/69 (43%)
Sox30NP_775560.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..117
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..226
SOX-TCF_HMG-box 365..435 CDD:238684 30/69 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..604 32/186 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 704..724
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 756..782
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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