Protein Alignment Sox100B and Sox6

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: XP_006507560.1
• Gene: Sox6 / 20679
• MGIID: 98368
• Length: 828
• Species: Mus musculus
• Alignment Length: 278
• Identity: 67/278 - (24%)
• Similarity: 111/278 - (39%)
• Gaps: 87/278 - (31%)

  Fly     1 MSDSSSSNCSKDRAKPVETLVLANYALKAEQKKAQGQGGRKEDERITTAVM-----------KVL 54
            |::...|||..::.:           .:.|....|..|...||.::...|:           |.:
Mouse   529 MNNMGLSNCRTEKER-----------TRFENLGPQLTGKSSEDGKLGPGVIDLTRPEDAEGSKAM 582

  Fly    55 EG--------YDW---NLVQASAKAPTDRK-----KEHIKRPMNAFMVWAQAARRVMSKQYPHLQ 103
            .|        |.|   ....|.|:...|.:     :.|||||||||||||:..||.:.:.:|.:.
Mouse   583 NGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMH 647

  Fly   104 NSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVLPSQQ-------- 160
            ||.:||.||..||::.:.:|:|:.|...:|...|.:::|:|||:||.|:..::..::
Mouse   648 NSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQ 712

  Fly   161 ------------------------SGEG-----------GSPGPEMTLSATMGSSGKPRSS---- 186
                                    :|.|           .:|.|:|| |....:|..|..|
Mouse   713 LMRSRRQEMRQFFTVGQQPQMPITTGTGVVYPGAITMATTTPSPQMT-SDCSSTSASPEPSLPVI 776

  Fly   187 -NSNGQRRAGKGNAAADL 203
             ::.|.:..|...|..|:
Mouse   777 QSTYGMKMDGASLAGNDM 794

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	34/73 (47%)
Sox6	XP_006507560.1	HMG-box_EGL13-like	619..696	CDD:438848	35/76 (46%)