Protein Alignment Sox100B and sox-2

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: NP_741836.1
• Gene: sox-2 / 181002
• WormBaseID: WBGene00004949
• Length: 283
• Species: Caenorhabditis elegans
• Alignment Length: 134
• Identity: 49/134 - (36%)
• Similarity: 73/134 - (54%)
• Gaps: 36/134 - (26%)

  Fly    36 GQGGRKEDERITTAVMKVLEGYDWNLVQASAKAPTDRKKEHIKRPMNAFMVWAQAARRVMSKQYP 100
            |:.|:|.|:|                               :||||||||||::..|:.|:.:.|
 Worm    50 GKDGKKNDDR-------------------------------VKRPMNAFMVWSRGQRKKMALENP 83

  Fly   101 HLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVLPSQQSGEGG 165
            .:.|||:||.||..||.|.:.:|:||::.|::||..|.:|||||||:||||...:     :.:.|
 Worm    84 KMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSI-----NKKNG 143

  Fly   166 SPGP 169
            :|.|
 Worm   144 APIP 147

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	38/73 (52%)
sox-2	NP_741836.1	HMG-box_SoxB	58..137	CDD:438790	42/109 (39%)