DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and LOC1271029

DIOPT Version :10

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:XP_061513404.1 Gene:LOC1271029 / 1271029 VectorBaseID:AGAMI1_001276 Length:216 Species:Anopheles gambiae


Alignment Length:207 Identity:72/207 - (34%)
Similarity:106/207 - (51%) Gaps:24/207 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 EHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQ 139
            |||||||||||||::..||.|::..|.:.|||:||:||..||.|.:.:|:||::.|::||..|.:
Mosquito    17 EHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKNLGAQWKLLTEGEKRPFIDEAKRLRALHMK 81

  Fly   140 EHPDYKYQPRRKKARVLPSQQSGEGGSPGPEMTLSATMGSSGKPRSSN-SNGQRRAGKGNAAADL 203
            |||||||:||||               |.| :..|.|..|:..|..:. |:.:..|.:..:....
Mosquito    82 EHPDYKYRPRRK---------------PKP-LVKSPTPNSANHPNGTGPSSAKEPAPQSQSPVGR 130

  Fly   204 GSCASTISHANVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDS----PCSTASSMSSLT 264
            .|.:.|.....||. ...:|.:..|...|:.....:|....|:.|.:.|    |...|..:|.:.
Mosquito   131 TSFSPTQLTTPVGL-PPGIFPSYHFAYDLHQKAFWNLYGPHLLSTVVPSAYAVPPHAALPLSYIK 194

  Fly   265 PP--ATPYNVAP 274
            ||  :.|..:||
Mosquito   195 PPKASPPSPIAP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 41/73 (56%)
LOC1271029XP_061513404.1 None

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