Protein Alignment Sox100B and sox6

DIOPT Version :10

• Sequence 1: NP_651839.1
• Gene: Sox100B / 45039
• FlyBaseID: FBgn0024288
• Length: 529
• Species: Drosophila melanogaster
• Sequence 2: XP_031755685.1
• Gene: sox6 / 100144640
• XenbaseID: XB-GENE-483934
• Length: 804
• Species: Xenopus tropicalis
• Alignment Length: 298
• Identity: 75/298 - (25%)
• Similarity: 120/298 - (40%)
• Gaps: 63/298 - (21%)

  Fly     7 SNCSKDRAKPVETLVLANYALKA--------EQKKAQGQGGRKEDERITTAVMKVLEGYD----W 59
            :||..|  |.:...|.....:::        |....|..|...||.::...|:.:....|    .
 Frog   514 NNCRSD--KMLLDAVTGKICIRSAHTERTHFENLGPQLTGKPNEDGKLGPGVIDLTRPEDVEGGA 576

  Fly    60 NLVQASAKAPT---DRKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDS 121
            .:|:|.....|   ...:.|||||||||||||:..||.:.:.:|.:.||.:||.||..||.:.:.
 Frog   577 TVVEARVYRDTRGRSSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMSNQ 641

  Fly   122 DKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVLPSQQSGEG------GSPGPEMTLSATMGSS 180
            :|:|:.|...:|...|.:::|:|||:||.|:..::..::...|      .|...||....|:|..
 Frog   642 EKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQ 706

  Fly   181 GKPRSSNSNGQRRAGKGNAAADLGS------CAST------------------ISHANVGSNSSD 221
            .:...|...|....|..:.|....|      |:||                  :...::|.|  |
 Frog   707 PQIPISTPTGVVYPGTISMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKLDSGSLGGN--D 769

  Fly   222 VFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTASS 259
            :.:.|.              |..:.:...|.|.|..||
 Frog   770 LMNGED--------------EMEMYDDFEDDPKSDYSS 793

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox100B	NP_651839.1	HMG-box_SoxE	76..150	CDD:438840	34/73 (47%)
sox6	XP_031755685.1	HMG-box_EGL13-like	595..672	CDD:438848	35/76 (46%)