DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox100B and sox10

DIOPT Version :9

Sequence 1:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001093691.1 Gene:sox10 / 100101700 XenbaseID:XB-GENE-480304 Length:436 Species:Xenopus tropicalis


Alignment Length:493 Identity:146/493 - (29%)
Similarity:197/493 - (39%) Gaps:150/493 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KKAQGQGGRKEDER----ITTAVMKVLEGYDWNLVQASAKAPTDRK-KEHIKRPMNAFMVWAQAA 91
            ||.|.    .||||    |..||.:||.||||.||....:.....| |.|:||||||||||||||
 Frog    44 KKEQD----SEDERFPVCIREAVSQVLSGYDWTLVPMPVRVNGGSKSKPHVKRPMNAFMVWAQAA 104

  Fly    92 RRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQPRRKKARVL 156
            ||.::.|||||.|:||||:|||||:.|.::||:||:|.||:|||.||::||||||||||:|    
 Frog   105 RRKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAERLRMQHKKDHPDYKYQPRRRK---- 165

  Fly   157 PSQQSGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGNAAADLGSCASTISHANVGSNSSD 221
                                   :|||.....:|...|..|.|:.......|.:.|.: ||..||
 Frog   166 -----------------------NGKPNPGEGDGSSEAEGGAASIQAHYKNSHLDHRH-GSPMSD 206

  Fly   222 VFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLTPPATP---YNVAPSNAKASAAN 283
            .                            :|..|...|....|||.||   .....|:.|.    
 Frog   207 G----------------------------NSEHSAGQSHGPPTPPTTPKTELQAGKSDGKR---- 239

  Fly   284 NPSLLLRQLSEPVANAGDGYGVLLEAGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEMDFLENIN 348
                             ||...|.|.|:.::..|.|:....|..|.:..|.....:...:|.. |
 Frog   240 -----------------DGSRSLGEGGKPHIDFGNVDIGEISHDVMANMETFDVNEFDQYLPP-N 286

  Fly   349 GY-------GGYTGSRVSYPAYSYPANGG-------------HFATEEQQQQQALQASEALNY-- 391
            |:       ||||.        ||..:|.             |..|:.:.|.:. ::|...:|  
 Frog   287 GHAGHPSHIGGYTS--------SYGLSGALAAGPSAWALAKQHPQTDSKAQVKT-ESSSTSHYTE 342

  Fly   392 KPAAADIDPKEIDQYFMDQMLPMTQHHHPHHTHPLHHPLHHSPPLNSSASLSSACSSASSQQPVA 456
            :|:.:              .|..|....||:.             ::..|:|......:..||.:
 Frog   343 QPSTS--------------QLTYTSLGLPHYG-------------SAFPSISRPQFDYADHQPSS 380

  Fly   457 EYYEHLGYSPAASSASQNPNFGPQQPYANGAASMTPTL 494
            .||.|  .|.|:|..|.....||.|.....|.|.:|::
 Frog   381 SYYSH--SSQASSLYSAFSYMGPPQRPLYTAISDSPSV 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 49/69 (71%)
sox10NP_001093691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 7/14 (50%)
Sox_N 12..79 CDD:372113 18/38 (47%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P56693 48..88 16/43 (37%)
SOX-TCF_HMG-box 89..159 CDD:238684 49/69 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..183 21/64 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..257 20/111 (18%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P56693 209..295 23/107 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..346 5/24 (21%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P56693 327..436 25/120 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..436 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 114 1.000 Domainoid score I5997
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 177 1.000 Inparanoid score I3927
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 1 1.000 - - otm48100
Panther 1 1.100 - - O PTHR45803
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5318
SonicParanoid 1 1.000 - - X1210
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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