DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp4-19C and ppef1

DIOPT Version :9

Sequence 1:NP_001285489.1 Gene:Pp4-19C / 45031 FlyBaseID:FBgn0023177 Length:307 Species:Drosophila melanogaster
Sequence 2:XP_021335306.1 Gene:ppef1 / 559132 ZFINID:ZDB-GENE-080303-27 Length:729 Species:Danio rerio


Alignment Length:402 Identity:97/402 - (24%)
Similarity:155/402 - (38%) Gaps:120/402 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SDLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDS----PVTVCGDIHGQFYDLKEL 65
            :|.:..:...|..:.:....|..|..:.::.|.:..||..:.:    .:|:|||:||:..||..:
Zfish   136 TDTNALLSAFKEEQTLHGKYVLQLLYETKKFLKQMPNVIYLSTSYAKEITICGDLHGRLDDLLLI 200

  Fly    66 F-KVGGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 129
            | |.|....|..|:|.|||||||..|.|..::|.|..:.|||.:.|.|||||...:...|||..|
Zfish   201 FYKNGLPSAENPYIFNGDFVDRGKKSTEIIIILFAFVLLYPDHMHLNRGNHEDHIMNLRYGFTRE 265

  Fly   130 CLRKYGS--TAVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQYLDQIRSIDR---------- 182
            .::||.:  ..:.:...::|..|.::.:||.|:..||||:|.... ||.:.:::|          
Zfish   266 VMQKYKTHGREILQLLQDVFSLLPVATVIDNKVLIVHGGISDKTD-LDFLSTVERHKVKSALRLP 329

  Fly   183 KQEVPH-------------------------------------------------DGPMC----- 193
            |:...|                                                 ...||     
Zfish   330 KRSTDHLTVRSCSRSSSRNRGRNSRSSSRHSSRSRRKKLSKQGSRSSSSSSSSSSSSSMCSPRVS 394

  Fly   194 -------------------------------------------DLLWSDPEDQTGWGVSP---RG 212
                                                       |:|||||:.|.  |.||   ||
Zfish   395 AKNTPRRPPPSPTDMLQVPFLDSFVSLEPPELPREELEWQQVVDILWSDPKHQN--GCSPNSFRG 457

  Fly   213 AGYLFGSDVVSQFNRTNDIDMICRAHQLVMEGFKWHFNETVLTVWSAPNYCYRCGNVAAILELNE 277
            .|..||.||.....:.:.:.::.|:|:...||::...|..|:|::||.||.....|..|.::|..
Zfish   458 GGCYFGPDVTQTLLQKHGLCLLIRSHECKQEGYELCHNGQVITIFSASNYYEEGSNRGAYVKLGP 522

  Fly   278 YLHRDFVIFEAA 289
            .|...|..::.:
Zfish   523 ELVPRFFQYQVS 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp4-19CNP_001285489.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 97/401 (24%)
ppef1XP_021335306.1 IQ 32..54 CDD:197470
MPP_RdgC 132..532 CDD:277364 97/398 (24%)
EFh_PEF 567..715 CDD:330173
EF-hand motif 567..600 CDD:320054
EF-hand motif 609..649 CDD:320054
EFh 650..716 CDD:238008
EF-hand motif 650..683 CDD:320054
EF-hand motif 690..719 CDD:320054
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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