DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp4-19C and ppp1cbl

DIOPT Version :9

Sequence 1:NP_001285489.1 Gene:Pp4-19C / 45031 FlyBaseID:FBgn0023177 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_956210.1 Gene:ppp1cbl / 334597 ZFINID:ZDB-GENE-030131-6529 Length:281 Species:Danio rerio


Alignment Length:309 Identity:113/309 - (36%)
Similarity:176/309 - (56%) Gaps:57/309 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DYSDLDRQIEQLKRC---EIIK--ENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDL 62
            |...|..::.:::.|   :|::  |.||:.||.|:|||.:.:        |:            |
Zfish     7 DVDSLISRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQ--------PI------------L 51

  Fly    63 KELFKVGGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFY 127
            .||                          ||..||||.|::||:...|:|||||...|.::||||
Zfish    52 LEL--------------------------ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 90

  Fly   128 DECLRKYGSTAVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQYLDQIRSIDRKQEVPHDGPM 192
            |||.|:: :..:|:..|:.|:.|.::||:|.||||.||||||.:|.::|||.|.|..:||..|.:
Zfish    91 DECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLL 154

  Fly   193 CDLLWSDPE-DQTGWGVSPRGAGYLFGSDVVSQFNRTNDIDMICRAHQLVMEGFKWHFNETVLTV 256
            ||||||||: |..|||.:.||..:.||:||||:|...:|:|:||||||:|.:|:::.....::|:
Zfish   155 CDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 219

  Fly   257 WSAPNYCYRCGNVAAILELNEYLHRDFVIFEAAPQESR----GIPSKKP 301
            :||||||....|...::.::|.|...|.|.:.:.::::    |:.|.:|
Zfish   220 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGMNSGRP 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp4-19CNP_001285489.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 109/289 (38%)
ppp1cblNP_956210.1 PTZ00480 3..254 CDD:185658 110/293 (38%)
MPP_superfamily 7..251 CDD:301300 110/290 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.