DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp4-19C and Ppef1

DIOPT Version :9

Sequence 1:NP_001285489.1 Gene:Pp4-19C / 45031 FlyBaseID:FBgn0023177 Length:307 Species:Drosophila melanogaster
Sequence 2:XP_038955765.1 Gene:Ppef1 / 317498 RGDID:1562772 Length:664 Species:Rattus norvegicus


Alignment Length:313 Identity:97/313 - (30%)
Similarity:160/313 - (51%) Gaps:40/313 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YSDLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDS----PVTVCGDIHGQFYDLKE 64
            ::|::..::..|:.:.:..:.|..:..:||:||.:..|..|:.:    .:|:|||:||:..||..
  Rat   143 FTDINLLLQAFKQQQTLHAHYVLEVLFEARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLML 207

  Fly    65 LFKVGGDVPEKN-YLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYD 128
            :|...|...||| |:|.|||||||..|:|..::||...:.||..:.|.|||||...:...|||..
  Rat   208 IFYKNGLPSEKNPYVFNGDFVDRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTK 272

  Fly   129 ECLRKY--GSTAVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPS--IQYLDQIR----------- 178
            |.|:||  ....:.:...|::.:|.:..|||.:|..:|||:|.|  :..|.|::           
  Rat   273 EILQKYKLHGKKILQVLEELYTWLPIGTIIDNEILVIHGGISESTDLNILQQLQRNKMKSVLMPP 337

  Fly   179 -SIDRKQEVPHD--GP----------------MCDLLWSDPEDQTG-WGVSPRGAGYLFGSDVVS 223
             |.:::..:..:  ||                :.|||||||..:.| :..:.||.|..||.||.|
  Rat   338 MSTNQECNIKKNKAGPSEQSASEQLTKLEWEQIIDLLWSDPRGKKGCYPNTSRGGGCYFGPDVTS 402

  Fly   224 QFNRTNDIDMICRAHQLVMEGFKWHFNETVLTVWSAPNYCYRCGNVAAILELN 276
            :....|.:.|:.|:|:...:|::...:..|:||:||.||.....|..|.:.|:
  Rat   403 KVLNKNQLKMVIRSHECKPDGYEICHDGKVITVFSASNYYEEGSNRGAYIRLS 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp4-19CNP_001285489.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 97/311 (31%)
Ppef1XP_038955765.1 IQ 40..>57 CDD:197470
MPP_RdgC 140..466 CDD:277364 97/313 (31%)
PTZ00183 505..647 CDD:185503
EF-hand_7 582..650 CDD:404394
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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