DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp4-19C and SPOM_SPBC3F6.01C

DIOPT Version :10

Sequence 1:NP_524803.1 Gene:Pp4-19C / 45031 FlyBaseID:FBgn0023177 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_596740.1 Gene:SPOM_SPBC3F6.01C / 2541004 PomBaseID:SPBC3F6.01C Length:473 Species:Schizosaccharomyces pombe


Alignment Length:324 Identity:122/324 - (37%)
Similarity:176/324 - (54%) Gaps:31/324 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDYSD--LDRQIEQLKRCEIIKEN--EVKALCAK--------AREILVEEGNVQRVDSPV----- 49
            |||..  |::||.: :..|.:||.  :.|.|..|        .:|:|  |.....:|.||     
pombe   150 SDYDGVILEKQITK-EFVEDMKERFCQGKKLPLKFAYSILRDLKELL--EKTPSLIDIPVKGDET 211

  Fly    50 -TVCGDIHGQFYDLKELFKV-GGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIR 112
             .:|||.|||::||..:||: |...|...|||.|||||||.:|.|....|.|.|:.|||.:.:.|
pombe   212 LVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTEVAFTLYAYKLLYPDAVFINR 276

  Fly   113 GNHESRQITQVYGFYDECLRKYGSTAVWRYCTEIFDYLSLSAIIDGKIFCVHGGL-SPSIQYLDQ 176
            ||||:..:.:||||..||..|| :...:...:|.|..|.|.::|......||||| |.....|||
pombe   277 GNHETDDMNKVYGFEGECRSKY-NERTFNIFSETFSLLPLGSLISDSYLVVHGGLFSDDNVTLDQ 340

  Fly   177 IRSIDR--KQEVPHDGPMCDLLWSDPEDQTGWGVSPRGAGYLFGSDVVSQFNRTNDIDMICRAHQ 239
            :|:|||  |::....|.|.::||:||:...|.|.|.||.|..||.||..:|...|.:..:.|:|:
pombe   341 LRNIDRFSKKQPGQSGLMMEMLWTDPQPAPGRGPSKRGVGLQFGPDVSKRFCEANGLKAVIRSHE 405

  Fly   240 LVMEGFKWHFNETVLTVWSAPNYCYRCGNVAAILELNEYLHRDFVIFEAAPQESRGIPSKKPQA 303
            :..:|::...:...:||:||||||...||:.|::::.|.:..||..|||.|.     |:.:|.|
pombe   406 VRDQGYEVEHDGYCITVFSAPNYCDSTGNLGAVIKVKEDMELDFHQFEAVPH-----PNIRPMA 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp4-19CNP_524803.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 115/305 (38%)
SPOM_SPBC3F6.01CNP_596740.1 PLN03088 1..>121 CDD:215568
TPR repeat 5..33 CDD:276809
TPR repeat 38..68 CDD:276809
TPR repeat 73..101 CDD:276809
MPP_PP5_C 152..467 CDD:277362 120/322 (37%)
Blue background indicates that the domain is not in the aligned region.

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