DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp4-19C and ppb1

DIOPT Version :10

Sequence 1:NP_524803.1 Gene:Pp4-19C / 45031 FlyBaseID:FBgn0023177 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_596178.1 Gene:ppb1 / 2540024 PomBaseID:SPBP4H10.04 Length:554 Species:Schizosaccharomyces pombe


Alignment Length:269 Identity:114/269 - (42%)
Similarity:159/269 - (59%) Gaps:15/269 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPEKNYLFMGDFV 84
            :.|.:...:..||.|||..|.|:..||:|||||||||||:|||.:||:|||:.....|||:||:|
pombe    85 LSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYLFLGDYV 149

  Fly    85 DRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSTAVWRYCTEIFDY 149
            ||||:|:|..|.|.|||:.||..:.|:|||||...:|..:.|..||..|| :..|:..|.:.|:.
pombe   150 DRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKY-NIKVYEACLQSFNA 213

  Fly   150 LSLSAIIDGKIFCVHGGLSPSIQYLDQIRSIDRKQEVPHDGPMCDLLWSDPEDQTGWGVS----- 209
            |.|:||::.:..||||||||.:..|:.||.|:|..|.|..|.|||||||||.:..|...|     
pombe   214 LPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSDPLEDFGSEKSNKHFI 278

  Fly   210 ---PRGAGYLFGSDVVSQFNRTNDIDMICRAHQLVMEGFKWHFN------ETVLTVWSAPNYCYR 265
               .||..|.:....|..|...|::..:.|||:....|::.:..      .:::|::|||||...
pombe   279 HNNVRGCSYFYSYQAVCTFLENNNLLSVIRAHEAQDVGYRMYRKTKTTGFPSLMTIFSAPNYLDV 343

  Fly   266 CGNVAAILE 274
            ..|.||:|:
pombe   344 YNNKAAVLK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp4-19CNP_524803.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 114/269 (42%)
ppb1NP_596178.1 MPP_PP2B 70..374 CDD:277361 114/269 (42%)

Return to query results.
Submit another query.