DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp4-19C and ZK938.1

DIOPT Version :9

Sequence 1:NP_001285489.1 Gene:Pp4-19C / 45031 FlyBaseID:FBgn0023177 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_496117.1 Gene:ZK938.1 / 191467 WormBaseID:WBGene00014158 Length:327 Species:Caenorhabditis elegans


Alignment Length:314 Identity:125/314 - (39%)
Similarity:183/314 - (58%) Gaps:24/314 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDV 72
            |.....|..|  |||.::..:..:.::||..:..:..|.:|:.||||||||:.||..:|......
 Worm    16 DTSNASLTHC--IKEADIDGVIEECKDILSAQATMVEVQAPIAVCGDIHGQYTDLLRIFNRCSFP 78

  Fly    73 PEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGST 137
            |::||||:||:||||...:|...||:|.|||||:...::|||||...|.:.|||||||.|:| |.
 Worm    79 PDQNYLFLGDYVDRGRQQLEVICLLMAYKVRYPNGFFILRGNHECASINRTYGFYDECKRRY-SL 142

  Fly   138 AVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQYLDQIRSIDRKQEVPHDGPMCDLLWSDPE- 201
            |::.....:|:.|.|.|:|.|:|||:||||||.:....|:..|.|..:.|:.....||||:||| 
 Worm   143 ALYNEFQNLFNSLPLCAMISGRIFCMHGGLSPELVSWTQLAKIIRPFDPPNACLAMDLLWADPEN 207

  Fly   202 DQTGWGVSPRGAGYLFGSDVVSQFNRTNDIDMICRAHQLVMEGFKWHFNETVLTVWSAPNYCYRC 266
            :.||||.:.||..|:||::||..|....:||:|.|.||:|.:|:::..::.::|::|||.||...
 Worm   208 NHTGWGKNSRGVSYIFGANVVKDFTEKMNIDLIARGHQVVQDGYEFFADKRLVTIFSAPKYCGEF 272

  Fly   267 GNVAAILELNEYLHRDFVIFEAAPQE--------------------SRGIPSKK 300
            .|.|.|:.::|.|...|.|.:.|.:|                    |||..|||
 Worm   273 DNNAGIMIVDERLIISFEILKPAMREVKIQARAAAKNKSTRSILVSSRGPKSKK 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp4-19CNP_001285489.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 117/282 (41%)
ZK938.1NP_496117.1 MPP_superfamily 3..294 CDD:301300 117/280 (42%)
PP2Ac 28..296 CDD:197547 112/268 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.