DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp4-19C and gsp-3

DIOPT Version :9

Sequence 1:NP_001285489.1 Gene:Pp4-19C / 45031 FlyBaseID:FBgn0023177 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_491429.1 Gene:gsp-3 / 172082 WormBaseID:WBGene00021113 Length:305 Species:Caenorhabditis elegans


Alignment Length:276 Identity:112/276 - (40%)
Similarity:181/276 - (65%) Gaps:1/276 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPEKNYLFMGDFV 84
            :.|.|::..||.|:.:...:.::..|:.|:.||||||||:.||..:|...|..|:.|:||:||:|
 Worm    28 VNEQELQTCCAVAKSVFASQASLLEVEPPIIVCGDIHGQYSDLLRIFDKNGFPPDVNFLFLGDYV 92

  Fly    85 DRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSTAVWRYCTEIFDY 149
            |||..::||..|:|..|::||:...::|||||...|.:|||||:||.|:|.||.:|....:.|::
 Worm    93 DRGRQNIETICLMLCFKIKYPENFFMLRGNHECPAINRVYGFYEECNRRYKSTRLWSIFQDTFNW 157

  Fly   150 LSLSAIIDGKIFCVHGGLSPSIQYLDQIRSIDRKQEVPHDGPMCDLLWSDPEDQT-GWGVSPRGA 213
            :.|..:|..:|.|:||||||.:|.|||:|.:.|.|:.|:.....||||:||:... ||..:.||.
 Worm   158 MPLCGLIGSRILCMHGGLSPHLQTLDQLRQLPRPQDPPNPSIGIDLLWADPDQWVKGWQANTRGV 222

  Fly   214 GYLFGSDVVSQFNRTNDIDMICRAHQLVMEGFKWHFNETVLTVWSAPNYCYRCGNVAAILELNEY 278
            .|:||.|||:......|||::.||||:|.:|:::..::.::|::|||:||.:..|.||.::::|.
 Worm   223 SYVFGQDVVADVCSRLDIDLVARAHQVVQDGYEFFASKKMVTIFSAPHYCGQFDNSAATMKVDEN 287

  Fly   279 LHRDFVIFEAAPQESR 294
            :...||:::..|:..|
 Worm   288 MVCTFVMYKPTPKSMR 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp4-19CNP_001285489.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 110/270 (41%)
gsp-3NP_491429.1 MPP_superfamily 6..297 CDD:301300 110/268 (41%)
PP2Ac 29..299 CDD:197547 110/269 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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