DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zfrp8 and Pdcd2l

DIOPT Version :9

Sequence 1:NP_001286828.1 Gene:Zfrp8 / 45021 FlyBaseID:FBgn0021875 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001103014.1 Gene:Pdcd2l / 689637 RGDID:1589941 Length:360 Species:Rattus norvegicus


Alignment Length:389 Identity:110/389 - (28%)
Similarity:171/389 - (43%) Gaps:98/389 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LGFAEKSDNG------AWLSNRYFPSKLGGQPAWLELEALPPTSQ--LQCSKCRAPKSFLAQLYA 61
            |||.:.:..|      ||.:     ||:||.|     :|||..:.  .:|.:|..|.:.:.|:|.
  Rat    10 LGFRDSAVKGCPKGPAAWTA-----SKIGGVP-----DALPAVTAPGPRCDRCAQPLALVVQVYC 64

  Fly    62 PFEDEYNFHRSIYVFLCRNSDCQEAQNASNFTVLRS---QLPRK--------------------- 102
            |.|.. .|||.:|||.|...||.:.|..| :.|.||   |:|.|                     
  Rat    65 PLEGS-PFHRLLYVFACARRDCSDNQTRS-WKVFRSQCLQVPEKETRNGQNQSEGLAAENWCEGS 127

  Fly   103 NKFFSEEE-------PSDVGQPLPAVPCLKKLCAACGCHAPHACSKCKAIHYCSPEHQRAHWPQH 160
            :.:.|:.|       |:|:|:.            :....|.....|.:|:|........|     
  Rat   128 HDWGSDTEETPPPPPPADLGRD------------SNDARALDWTDKLQALHLQDSALAVA----- 175

  Fly   161 KPNCGAPEVATEKPLTQIVFPEFEIVMDSNPVESGEEDKDDEAR--LAEFQELESSGKTGDLS-N 222
               |.:|.|.||.|..|   |.:..|.:.:  |.|.....|.|.  |.|:|:.|.......|| .
  Rat   176 ---CPSPSVPTEVPQFQ---PYYISVAEED--EYGNVADLDHAHSLLQEYQQREGVDMQQLLSVG 232

  Fly   223 VSEAEMDKYFGNSAAADDKTFRQFKKQTAAEPDQIVRYKRGGQPLWITNTVKTVEDQLNKLPNCI 287
            .|:.: :||.....::.|.||.:|.|:.:....||:||...|:||::  :..|.|  ::::|.|.
  Rat   233 CSDGD-EKYEKTKVSSGDPTFYKFMKRISVCQGQILRYSWSGEPLFL--SCPTFE--VSEVPVCS 292

  Fly   288 ACGGERQFEFQIMPQALTLLEDENL----DWGVLAVYTCAKSC-------PIDGYVEELLIKQD 340
            .|||:|.||||:||..:::|...||    ::|.:.||||.:||       |::   |..:|::|
  Rat   293 GCGGQRAFEFQLMPALVSMLNSTNLGLTVEFGTILVYTCKQSCWPPNQQMPME---EFCVIQED 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfrp8NP_001286828.1 zf-MYND 128..164 CDD:280009 5/35 (14%)
PDCD2_C 238..340 CDD:282100 39/112 (35%)
Pdcd2lNP_001103014.1 PDCD2_C 238..352 CDD:282100 41/120 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54449
OrthoDB 1 1.010 - - D1181470at2759
OrthoFinder 1 1.000 - - FOG0001596
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

Return to query results.
Submit another query.