DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfrp8 and Pdcd2

DIOPT Version :9

Sequence 1:NP_001286828.1 Gene:Zfrp8 / 45021 FlyBaseID:FBgn0021875 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_113826.1 Gene:Pdcd2 / 58934 RGDID:61887 Length:343 Species:Rattus norvegicus


Alignment Length:356 Identity:145/356 - (40%)
Similarity:200/356 - (56%) Gaps:42/356 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IDLGFAEKSDNGAW-LSNRYFPSKLGGQPAWLELEALPPTSQLQCSKCRAPKSFLAQLYAPF--E 64
            ::|||.|::.  || |.:..||||:||:||||.|..||....|.|::|..|.:||.|:|||.  .
  Rat     9 VELGFVEEAP--AWRLRSEQFPSKVGGRPAWLALAELPGPGALACARCGRPLAFLLQVYAPLPGR 71

  Fly    65 DEYNFHRSIYVFLCRNSDCQEAQNASNFTVLRSQLPRKNKFFSEEEPSDVGQPLPAVPCLK---- 125
            || .||||:::|.||...|     .:...|.|:||||||.|:|.|.||:.|.......||:    
  Rat    72 DE-AFHRSLFLFCCREPLC-----CAGLRVFRNQLPRKNAFYSYEPPSETGASDTECVCLQLKSG 130

  Fly   126 -KLCAACGCHAPHACSKCKAIHYCSPEHQRAHWP-QHKPNCGAPEVATEK-PLTQIVFPEFEIVM 187
             .||..|||.||..||:||..||||.|||...|. .||..|...:..... |....:||||||| 
  Rat   131 AHLCRVCGCLAPMTCSRCKQAHYCSKEHQTLDWQLGHKQACTQSDHLDHMVPDHNFLFPEFEIV- 194

  Fly   188 DSNPVESGEEDKDDEARLAEFQELESSGKTGDLSNVSEAEMDKYFGNSAAADDKTFRQFKKQTAA 252
                .|:.:|...:...:.::.|:     .|.:..|.|.|:|. .....:.:|..|::||.:.|.
  Rat   195 ----TETEDEIGPEVVEMEDYSEV-----IGSMEGVPEEELDS-MAKHESKEDHIFQKFKSKIAL 249

  Fly   253 EPDQIVRYKRGGQPLWITNTVKTVED--QLNKLPNCIACGGERQFEFQIMPQALTLLEDENL--- 312
            ||:||:||.||.:|:||:.     |:  |...:|:| :||.:|.||||:|||.|..|:.:.|   
  Rat   250 EPEQILRYGRGIKPIWISG-----ENIPQEKDIPDC-SCGAKRIFEFQVMPQLLNHLKADRLGTS 308

  Fly   313 -DWGVLAVYTCAKSCPID-GYVEELLIKQDI 341
             |||:|||:|||:||.:. ||.||.:.|||:
  Rat   309 VDWGILAVFTCAESCSLGIGYTEEFVWKQDV 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfrp8NP_001286828.1 zf-MYND 128..164 CDD:280009 20/36 (56%)
PDCD2_C 238..340 CDD:282100 49/108 (45%)
Pdcd2NP_113826.1 zf-MYND 134..171 CDD:280009 20/36 (56%)
PDCD2_C 225..338 CDD:282100 51/119 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341457
Domainoid 1 1.000 109 1.000 Domainoid score I6255
eggNOG 1 0.900 - - E1_KOG2061
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1951
Inparanoid 1 1.050 240 1.000 Inparanoid score I3268
OMA 1 1.010 - - QHG54449
OrthoDB 1 1.010 - - D1181470at2759
OrthoFinder 1 1.000 - - FOG0001596
OrthoInspector 1 1.000 - - oto96497
orthoMCL 1 0.900 - - OOG6_103745
Panther 1 1.100 - - LDO PTHR12298
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4377
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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