DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zfrp8 and pdcd2

DIOPT Version :9

Sequence 1:NP_001286828.1 Gene:Zfrp8 / 45021 FlyBaseID:FBgn0021875 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001038603.1 Gene:pdcd2 / 393370 ZFINID:ZDB-GENE-040426-1236 Length:358 Species:Danio rerio


Alignment Length:359 Identity:140/359 - (38%)
Similarity:201/359 - (55%) Gaps:28/359 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EIDLGFAEKSDNGAWLSNRYFPSKLGGQPAWLELEALPPTSQLQCSKCRAPKSFLAQLYAPFEDE 66
            ::.|||.|::::...||:: ||||:||:||||....||..|:|||.:|:.|..||.|:|||. .|
Zfish    14 DVVLGFLEEAESWQLLSDQ-FPSKVGGRPAWLSQSDLPAVSELQCEECKLPAVFLLQVYAPV-TE 76

  Fly    67 YN--FHRSIYVFLCRNSDCQEAQNASNFTVLRSQLPRKNKFFSEEEPSD--VGQPLPAVPCL--- 124
            |:  |||:::||.|:...|....::..|.|.||||||||:|:....|.|  ..||:.....|   
Zfish    77 YDRCFHRTLFVFCCKTPACYTRNDSKCFKVFRSQLPRKNEFYPFNPPPDEKPEQPVHDAQVLGSG 141

  Fly   125 KKLCAACGCHAPHACSKCKAIHYCSPEHQRAHWPQ-HKPNCGAPEVATEKPLTQIVFPEFEIVMD 188
            .|||..|||....|||:|.::.||..|||...|.| ||..|.|........|...:|||:|:|.:
Zfish   142 LKLCRLCGCLGQKACSRCHSVTYCCKEHQTTDWKQRHKKECLAEASQVSGELNSFLFPEWELVTE 206

  Fly   189 SNPVESGEEDKDDEARLAEFQELESSGKTGDLSNVSEAEMDKYFGNSAAADDKTFRQFKKQTAAE 253
            ...:.:.:|       |.|...|:........|.:.::|::. .......|.|.|::||::.|.|
Zfish   207 PEVIPAKDE-------LQESPSLDQENIASLNSGLEDSELES-MALHETLDSKVFQKFKQRIANE 263

  Fly   254 PDQIVRYKRGGQPLWITNTVKTVEDQLNKLPNCIACGGERQFEFQIMPQALTLLE----DENLDW 314
            |.|::||.|||.|||:|......|::   :|.| .||.:|.||||||||.|..|:    |.::||
Zfish   264 PQQVLRYCRGGSPLWVTAEHVPREEE---VPEC-TCGAKRLFEFQIMPQLLNHLKVDSTDASIDW 324

  Fly   315 GVLAVYTCAKSCPI-DGYVEELLIKQDIVAEDQS 347
            |.:|:||||:||.. :.|..|.:.|||. :.||:
Zfish   325 GTVAIYTCAESCDQGNKYSPEFIWKQDF-SGDQA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfrp8NP_001286828.1 zf-MYND 128..164 CDD:280009 17/36 (47%)
PDCD2_C 238..340 CDD:282100 48/106 (45%)
pdcd2NP_001038603.1 zf-MYND 145..182 CDD:280009 17/36 (47%)
PDCD2_C 238..351 CDD:282100 49/117 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581451
Domainoid 1 1.000 105 1.000 Domainoid score I6602
eggNOG 1 0.900 - - E1_KOG2061
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1951
Inparanoid 1 1.050 238 1.000 Inparanoid score I3338
OMA 1 1.010 - - QHG54449
OrthoDB 1 1.010 - - D1181470at2759
OrthoFinder 1 1.000 - - FOG0001596
OrthoInspector 1 1.000 - - oto41119
orthoMCL 1 0.900 - - OOG6_103745
Panther 1 1.100 - - LDO PTHR12298
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1686
SonicParanoid 1 1.000 - - X4377
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1818.300

Return to query results.
Submit another query.