DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfrp8 and pdcd-2

DIOPT Version :9

Sequence 1:NP_001286828.1 Gene:Zfrp8 / 45021 FlyBaseID:FBgn0021875 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_497896.1 Gene:pdcd-2 / 259501 WormBaseID:WBGene00011116 Length:386 Species:Caenorhabditis elegans


Alignment Length:397 Identity:133/397 - (33%)
Similarity:199/397 - (50%) Gaps:77/397 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IDLGFAE--KSDNGAWLSNRYFP-SKLGGQPAWLELEALPPTSQLQCSKCRAPKSFLAQLYAP-- 62
            ::|||..  :.|:...|.:::.| .|:||:|:||..:.||.::.|.|:.|..|..||.|:.|.  
 Worm    10 VNLGFGVQFEPDDLYRLRSQFLPLGKIGGKPSWLNPKNLPKSADLLCNVCEKPLCFLMQVSANGG 74

  Fly    63 -FEDEYNFHRSIYVFLCRNSDCQEAQNASNFTVLRSQLPRKNKFFSEEEP------SDVGQP-LP 119
             .:..:.||||:::|:|||..|....:|:|....|.||||.|.::|.:.|      .||..| .|
 Worm    75 INDPPHAFHRSLFLFVCRNPSCSRTNDAANLKAFRCQLPRANDYYSFDGPMDPDLDGDVADPRAP 139

  Fly   120 AVPCLKKLCAACGCHAPHACSKCKAIHYCSPEHQRAHWPQHKPNCGAPEVATE--------KPLT 176
            |..  ..||..|||.|...|:||:...|||..||...||.||..|.  :.||:        .|..
 Worm   140 ADG--PGLCRICGCSAAKKCAKCQVARYCSQAHQVIDWPAHKLECA--KAATDGSITDEPKNPRN 200

  Fly   177 QIVFPEFEIVMDSNPV------------------ESGEEDKDDE---ARLAEFQEL--ESSGKTG 218
            ...|.||.:.:|...:                  |..:||:.:|   ||:.||::.  |:.||..
 Worm   201 AFCFKEFGVEIDQEYMPANLFDGLSDDEGDEEEEEGNDEDETEEEKKARIREFEKFVKENKGKNA 265

  Fly   219 DLSNVSEAEMDKYFGNSAAAD---DKTFRQFKKQTAAEPDQIVRYKRGGQPLWITNTVKTVEDQL 280
            |:   ::.::|:     |.|:   |..|.:|.:....:||||:||||.||||..|.        |
 Worm   266 DM---TKEDLDE-----ATAEQPKDIDFDKFNRLVNLQPDQIIRYKRYGQPLRATG--------L 314

  Fly   281 NKLPN----CIACGGERQFEFQIMPQALTLLE----DENLDWGVLAVYTCAKSCPI--DGYVEEL 335
            ::||.    |..||..|:||.|:||..|:|::    .:::||..:.||||:.||.|  |||.:|.
 Worm   315 SELPEVVEPCELCGAPRRFEMQLMPHLLSLIDVDAIGQSIDWASVYVYTCSASCQIADDGYAKEF 379

  Fly   336 LIKQDIV 342
            :.|||.:
 Worm   380 VAKQDFL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfrp8NP_001286828.1 zf-MYND 128..164 CDD:280009 17/35 (49%)
PDCD2_C 238..340 CDD:282100 45/114 (39%)
pdcd-2NP_497896.1 zf-MYND 146..182 CDD:366792 17/35 (49%)
PDCD2_C 269..384 CDD:367865 47/127 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159632
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1951
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3310
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1181470at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1686
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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