DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfrp8 and Pdcd2

DIOPT Version :9

Sequence 1:NP_001286828.1 Gene:Zfrp8 / 45021 FlyBaseID:FBgn0021875 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_032825.2 Gene:Pdcd2 / 18567 MGIID:104643 Length:343 Species:Mus musculus


Alignment Length:356 Identity:147/356 - (41%)
Similarity:201/356 - (56%) Gaps:42/356 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IDLGFAEKSDNGAW-LSNRYFPSKLGGQPAWLELEALPPTSQLQCSKCRAPKSFLAQLYAPFEDE 66
            ::|||||::.  || |.:..||||:||:||||.|..||....|.|::|..|.:||.|:|||....
Mouse     9 VELGFAEEAP--AWRLRSEQFPSKVGGRPAWLGLAELPGPGALACARCGRPLAFLLQVYAPLPGR 71

  Fly    67 YN-FHRSIYVFLCRNSDCQEAQNASNFTVLRSQLPRKNKFFSEEEPSDVGQPLPAVPCLK----- 125
            .: ||||:::|.||...|     .:...|.|:||||.|.|:|.|.||:.........||:     
Mouse    72 DDAFHRSLFLFCCREPPC-----CAGLRVFRNQLPRNNAFYSYEPPSETEALGTECVCLQLKSGA 131

  Fly   126 KLCAACGCHAPHACSKCKAIHYCSPEHQRAHWP-QHKPNC-GAPEVATEKPLTQIVFPEFEIVMD 188
            .||..|||.||..||:||..||||.|||...|. .||..| .:.::....|....:|||||||.:
Mouse   132 HLCRVCGCLAPMTCSRCKQAHYCSKEHQTLDWRLGHKQACTQSDKIDHMVPDHNFLFPEFEIVTE 196

  Fly   189 SNPVESGEEDKDDEARLAEFQELES-SGKTGDLSNVSEAEMDKYFGNSAAADDKTFRQFKKQTAA 252
            :          :||. |.|..|:|. |..||.:..:.|.|:|. .....:.:|..|::||.:.|.
Mouse   197 T----------EDEI-LPEVVEMEDYSEVTGSMGGIPEEELDS-MAKHESKEDHIFQKFKSKIAL 249

  Fly   253 EPDQIVRYKRGGQPLWITNTVKTVED--QLNKLPNCIACGGERQFEFQIMPQALTLLEDENL--- 312
            ||:||:||.||.:|:||:.     |:  |...:|:| .||.:|.||||:|||.|..|:.:.|   
Mouse   250 EPEQILRYGRGIKPIWISG-----ENIPQEKDIPDC-PCGAKRIFEFQVMPQLLNHLKADRLGRS 308

  Fly   313 -DWGVLAVYTCAKSCPI-DGYVEELLIKQDI 341
             |||||||:|||:||.: .||.||.:.|||:
Mouse   309 IDWGVLAVFTCAESCSLGSGYTEEFVWKQDV 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfrp8NP_001286828.1 zf-MYND 128..164 CDD:280009 20/36 (56%)
PDCD2_C 238..340 CDD:282100 50/108 (46%)
Pdcd2NP_032825.2 zf-MYND 134..171 CDD:280009 20/36 (56%)
PDCD2_C 225..338 CDD:282100 52/119 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837715
Domainoid 1 1.000 111 1.000 Domainoid score I6263
eggNOG 1 0.900 - - E1_KOG2061
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1951
Inparanoid 1 1.050 238 1.000 Inparanoid score I3360
Isobase 1 0.950 - 0 Normalized mean entropy S3310
OMA 1 1.010 - - QHG54449
OrthoDB 1 1.010 - - D1181470at2759
OrthoFinder 1 1.000 - - FOG0001596
OrthoInspector 1 1.000 - - oto92942
orthoMCL 1 0.900 - - OOG6_103745
Panther 1 1.100 - - LDO PTHR12298
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1686
SonicParanoid 1 1.000 - - X4377
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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