DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfrp8 and pdcd2

DIOPT Version :9

Sequence 1:NP_001286828.1 Gene:Zfrp8 / 45021 FlyBaseID:FBgn0021875 Length:347 Species:Drosophila melanogaster
Sequence 2:XP_002931535.1 Gene:pdcd2 / 100126680 XenbaseID:XB-GENE-959893 Length:369 Species:Xenopus tropicalis


Alignment Length:363 Identity:143/363 - (39%)
Similarity:200/363 - (55%) Gaps:34/363 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DLGFAEKSDNGAW-LSNRYFPSKLGGQPAWLELEALPPTSQLQCSKCRAPKSFLAQLYAPFEDEY 67
            :|||.::::  || |.:..||||:||:||||....:|..:.|||..|..|.:||.|:|||...  
 Frog    17 ELGFLQETE--AWRLRSPQFPSKVGGRPAWLGEVGVPDPAALQCGLCGKPLAFLLQVYAPCPG-- 77

  Fly    68 NFHRSIYVFLCRNSDCQEAQNASNFTVLRSQLPRKNKFFSEEEPSDVGQPLPA------VPCLKK 126
            :|||:|::|.|||..|........|.|.|:||||||..:|...|.:.|.|...      :.|..:
 Frog    78 SFHRTIFIFCCRNGSCHRESETRCFKVYRNQLPRKNDTYSYGPPPETGSPDGVGYISFELKCGLR 142

  Fly   127 LCAACGCHAPHACSKCKAIHYCSPEHQRAHWP-QHKPNCGAPEVATEKPLT----QIVFPEFEIV 186
            ||..|||..|..||||..::|||.|||...|. |||..|.  |......:|    ..:|||||||
 Frog   143 LCRVCGCLGPKTCSKCHKVNYCSKEHQLMDWKLQHKKVCN--EKFDVSSVTVGDHGFLFPEFEIV 205

  Fly   187 MDSNPVESG--EEDKDDEARLAEFQELESSG--KTGDLSNVSEAEMDKYFGNSAAADDKTFRQFK 247
            .:...:|..  .||::||.......::..:|  .:.|..|:.|.|::. .......:|..|..||
 Frog   206 TEPEDMEGDGKSEDEEDETVTEHDTQILPAGIETSVDGLNLDEQELES-MAKHETKEDMVFSNFK 269

  Fly   248 KQTAAEPDQIVRYKRGGQPLWITNT-VKTVEDQLNKLPNCIACGGERQFEFQIMPQALTLLE--- 308
            |..|.||:|::||.||..||||::. :.:.:|    :|:| :||.:||||||:|||.|..|:   
 Frog   270 KSIALEPEQVLRYCRGSDPLWISHRHIPSEKD----IPDC-SCGMKRQFEFQVMPQLLNHLKVDS 329

  Fly   309 -DENLDWGVLAVYTCAKSCPID-GYVEELLIKQDIVAE 344
             .|::|||||||:|||.:|..: .|..|.|.||||..:
 Frog   330 LGESIDWGVLAVFTCAANCSGEKPYATEFLWKQDIAGD 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfrp8NP_001286828.1 zf-MYND 128..164 CDD:280009 19/36 (53%)
PDCD2_C 238..340 CDD:282100 49/107 (46%)
pdcd2XP_002931535.1 zf-MYND 144..181 CDD:366792 19/36 (53%)
PDCD2_C 252..363 CDD:367865 49/116 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6295
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1951
Inparanoid 1 1.050 237 1.000 Inparanoid score I3296
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1181470at2759
OrthoFinder 1 1.000 - - FOG0001596
OrthoInspector 1 1.000 - - oto103207
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1686
SonicParanoid 1 1.000 - - X4377
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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