DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ae and Lcp65Ac

DIOPT Version :9

Sequence 1:NP_788468.1 Gene:Lcp65Ae / 45018 FlyBaseID:FBgn0020640 Length:99 Species:Drosophila melanogaster
Sequence 2:NP_477279.1 Gene:Lcp65Ac / 38708 FlyBaseID:FBgn0020642 Length:109 Species:Drosophila melanogaster


Alignment Length:97 Identity:58/97 - (59%)
Similarity:71/97 - (73%) Gaps:5/97 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVFVAIFAFALANEA-----QIINLESDVGPENFQWSFETSDGQAANAKGQLKYPNTDHESLAVQ 64
            |||.|:||..||..|     ||:.|||||.||.:.::.|||||:....:||||...|:.|::.|:
  Fly     7 IVFTALFAVVLAAPAPDADTQILRLESDVQPEGYNFALETSDGKKHEEQGQLKNVGTEQEAIVVR 71

  Fly    65 GSFRFVADDGQTYEVNYIADENGFQPQGAHLP 96
            ||:.|||||||||.||||||||||||:|||||
  Fly    72 GSYSFVADDGQTYTVNYIADENGFQPEGAHLP 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AeNP_788468.1 Chitin_bind_4 33..88 CDD:278791 31/54 (57%)
Lcp65AcNP_477279.1 Chitin_bind_4 40..95 CDD:278791 31/54 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466868
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H43214
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D130920at33392
OrthoFinder 1 1.000 - - FOG0005922
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.950

Return to query results.
Submit another query.