DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Ae and Lcp2

DIOPT Version :9

Sequence 1:NP_788468.1 Gene:Lcp65Ae / 45018 FlyBaseID:FBgn0020640 Length:99 Species:Drosophila melanogaster
Sequence 2:NP_001260802.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster


Alignment Length:107 Identity:34/107 - (31%)
Similarity:55/107 - (51%) Gaps:24/107 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFLIVFVAI-FAFALAN-------EAQIINLESDVGPENFQWSFETSDG--QAA--NAKGQLKYP 54
            ||:::...: .|.|||.       .|.:::...||..:.|..|..||:|  |||  :|.|.    
  Fly     3 KFVMILAVVGVATALAPVSRSDDVHADVLSRSDDVRADGFDSSLHTSNGIEQAASGDAHGN---- 63

  Fly    55 NTDHESLAVQGSFRFVADDGQTYEVNYIADENGFQPQGAHLP 96
                    :.|:|.:::.:|:..||.|:|:|||:||.||.:|
  Fly    64 --------IHGNFGWISPEGEHVEVKYVANENGYQPSGAWIP 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AeNP_788468.1 Chitin_bind_4 33..88 CDD:278791 19/58 (33%)
Lcp2NP_001260802.1 Chitin_bind_4 42..89 CDD:278791 19/58 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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