DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ae and Lcp2

DIOPT Version :10

Sequence 1:NP_788468.1 Gene:Lcp65Ae / 45018 FlyBaseID:FBgn0020640 Length:99 Species:Drosophila melanogaster
Sequence 2:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster


Alignment Length:107 Identity:34/107 - (31%)
Similarity:55/107 - (51%) Gaps:24/107 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFLIVFVAI-FAFALAN-------EAQIINLESDVGPENFQWSFETSDG--QAA--NAKGQLKYP 54
            ||:::...: .|.|||.       .|.:::...||..:.|..|..||:|  |||  :|.|.    
  Fly     3 KFVMILAVVGVATALAPVSRSDDVHADVLSRSDDVRADGFDSSLHTSNGIEQAASGDAHGN---- 63

  Fly    55 NTDHESLAVQGSFRFVADDGQTYEVNYIADENGFQPQGAHLP 96
                    :.|:|.:::.:|:..||.|:|:|||:||.||.:|
  Fly    64 --------IHGNFGWISPEGEHVEVKYVANENGYQPSGAWIP 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AeNP_788468.1 Chitin_bind_4 33..88 CDD:459790 19/58 (33%)
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 19/58 (33%)

Return to query results.
Submit another query.