DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Af and Edg84A

DIOPT Version :10

Sequence 1:NP_477274.1 Gene:Lcp65Af / 45017 FlyBaseID:FBgn0020639 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_524247.1 Gene:Edg84A / 40818 FlyBaseID:FBgn0000552 Length:188 Species:Drosophila melanogaster


Alignment Length:85 Identity:25/85 - (29%)
Similarity:34/85 - (40%) Gaps:12/85 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VFVALFALAVADVQILKQES-----DVGP-VSFNYGYETSDGSSAQAAGQLKNVGTDEEALNVKG 64
            :||.|..||.|.....|...     |..| .||||..:..:      .|.:|:.....:...|.|
  Fly     7 LFVTLIGLAQAGPLPAKSSGSEDTYDSHPQYSFNYDVQDPE------TGDVKSQSESRDGDVVHG 65

  Fly    65 TYSFVADDGQTYSIAYTADE 84
            .||....||...::.||||:
  Fly    66 QYSVNDADGYRRTVDYTADD 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AfNP_477274.1 Chitin_bind_4 32..87 CDD:459790 15/53 (28%)
Edg84ANP_524247.1 Chitin_bind_4 37..89 CDD:459790 16/55 (29%)

Return to query results.
Submit another query.