DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Af and Edg78E

DIOPT Version :9

Sequence 1:NP_477274.1 Gene:Lcp65Af / 45017 FlyBaseID:FBgn0020639 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_001287140.1 Gene:Edg78E / 40354 FlyBaseID:FBgn0000551 Length:122 Species:Drosophila melanogaster


Alignment Length:106 Identity:38/106 - (35%)
Similarity:52/106 - (49%) Gaps:17/106 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFLIVFVALFALAVA-----DVQILKQESDVGPV--SFNYGYETSDGSSAQAAGQLKNVGTDEEA 59
            |:|.. :||...|.|     |.||...::|....  ::.|.||||:|...|.||         .|
  Fly     3 KYLFC-LALIGCACADNINKDAQIRSFQNDATDAEGNYQYAYETSNGIQIQEAG---------NA 57

  Fly    60 LNVKGTYSFVADDGQTYSIAYTADENGYQPQGAHLPVAPVV 100
            ...:|..::|:.:|:..|:.|||||.||.|.|.|||..|.|
  Fly    58 NGARGAVAYVSPEGEHISLTYTADEEGYHPVGDHLPTPPPV 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AfNP_477274.1 Chitin_bind_4 32..87 CDD:278791 19/54 (35%)
Edg78ENP_001287140.1 Chitin_bind_4 39..85 CDD:395303 19/54 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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