DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Af and Cpr78Ca

DIOPT Version :9

Sequence 1:NP_477274.1 Gene:Lcp65Af / 45017 FlyBaseID:FBgn0020639 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_649298.2 Gene:Cpr78Ca / 40352 FlyBaseID:FBgn0037067 Length:127 Species:Drosophila melanogaster


Alignment Length:112 Identity:30/112 - (26%)
Similarity:51/112 - (45%) Gaps:22/112 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKF--LIVFVAL----------FALAVADVQILKQESDVGPVS-FNYGYETSDGSSAQAAGQLKN 52
            |.|  ::||:.|          |.....|..|..:.:...|.. :::.::|::|.:.:.||. :|
  Fly     2 MSFGKIVVFLVLVLVQLIHCTRFTAPSLDRTIYYRNTPPDPFGHYSFEFQTTNGITTKGAGN-EN 65

  Fly    53 VGTDEEALNVKGTYSFVADDGQTYSIAYTADENGYQPQGAHLPVAPV 99
                    ...|...||:.:|...:.:|.||.|||||.|.|:|..|:
  Fly    66 --------GAVGVVQFVSPEGIPVTFSYVADANGYQPTGDHIPAIPL 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AfNP_477274.1 Chitin_bind_4 32..87 CDD:278791 13/54 (24%)
Cpr78CaNP_649298.2 Chitin_bind_4 46..92 CDD:278791 13/54 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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