DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Af and Cpr78Ca

DIOPT Version :10

Sequence 1:NP_477274.1 Gene:Lcp65Af / 45017 FlyBaseID:FBgn0020639 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_649298.2 Gene:Cpr78Ca / 40352 FlyBaseID:FBgn0037067 Length:127 Species:Drosophila melanogaster


Alignment Length:293 Identity:59/293 - (20%)
Similarity:89/293 - (30%) Gaps:106/293 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PPVVLLHRPPSLTFMDEILTREFRTLITDTSSSESLPSFFPRHASSARAFVISGR--LPVTD--- 66
            ||.:||.           ..||.|:...|.:....|.:.......|||.....|:  ||:..   
  Fly   466 PPAILLR-----------FLREHRSEWADNNIDAYLAAAVKVGPCSARVGGFGGQVILPLAHTIE 519

  Fly    67 ----------ELLSHLPSLQIL--------VCTSVGIDHIDLAACKRRGIVITNAGNAFSDDVAD 113
                      |.|.|.|...|:        :|:  |:|...:..|..  ::......:|:||.. 
  Fly   520 HEEFMEVIKLEGLGHSPEDAIVPRDIFLLQLCS--GMDENAVGTCAE--LIFAPIDASFADDAP- 579

  Fly   114 CAVGLLISVLRRIP--AADRYVRSGN--------------WAKFGDFQLGSKVSGKRVGIVGLG- 161
                ||.|..|.||  :|.:.|.|.|              ..|....|.|:....:.|..:... 
  Fly   580 ----LLPSGFRIIPLDSAKQEVSSPNRTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEF 640

  Fly   162 SIGSFVAKRLESFG-----CVISYNSRSQKQSSP----------------------------YRY 193
            .|.|.:.:.:.|..     .:||...|.....||                            ||.
  Fly   641 GIESHMQEHVASMARQYVRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRG 705

  Fly   194 YSDILSLAENND----VL---------VLCCSL 213
            |..:..|..|:|    :|         ::|||:
  Fly   706 YMGVELLKSNSDGNESILKNLWHHTDAIICCSM 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AfNP_477274.1 Chitin_bind_4 32..87 CDD:459790 15/77 (19%)
Cpr78CaNP_649298.2 Chitin_bind_4 46..92 CDD:459790
Blue background indicates that the domain is not in the aligned region.

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