DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Af and Cpr65Ec

DIOPT Version :9

Sequence 1:NP_477274.1 Gene:Lcp65Af / 45017 FlyBaseID:FBgn0020639 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_648077.1 Gene:Cpr65Ec / 38775 FlyBaseID:FBgn0035737 Length:127 Species:Drosophila melanogaster


Alignment Length:114 Identity:42/114 - (36%)
Similarity:55/114 - (48%) Gaps:30/114 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFLIVFVALFALAVADVQI---------------LKQESDVGPVSFNYGYETSDGSSAQAAGQLK 51
            ||.::.||  ||||:.||.               ||::.     |:.|.|:||:|    .|||..
  Fly     3 KFFVLAVA--ALAVSCVQADSFDARAETREYKSDLKEDG-----SYAYQYQTSNG----IAGQES 56

  Fly    52 NVGTDEEALNVKGTYSFVADDGQTYSIAYTADENGYQPQGAHLPVAPVV 100
            .||    .....|:.::.|.|||...:.||||.|||.|.|||||..|.:
  Fly    57 GVG----GYYASGSNAYYAPDGQLIQLTYTADSNGYHPAGAHLPTPPPI 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AfNP_477274.1 Chitin_bind_4 32..87 CDD:278791 20/54 (37%)
Cpr65EcNP_648077.1 Chitin_bind_4 41..88 CDD:278791 20/54 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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