DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Af and Cpr49Aa

DIOPT Version :9

Sequence 1:NP_477274.1 Gene:Lcp65Af / 45017 FlyBaseID:FBgn0020639 Length:100 Species:Drosophila melanogaster
Sequence 2:NP_001097285.1 Gene:Cpr49Aa / 246413 FlyBaseID:FBgn0050045 Length:144 Species:Drosophila melanogaster


Alignment Length:114 Identity:41/114 - (35%)
Similarity:64/114 - (56%) Gaps:14/114 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFLIVFVALFALAVAD-------------VQILKQESDVG-PVSFNYGYETSDGSSAQAAGQLK 51
            |::.::|:|...|::|.             :.|::||.:|. ..|:.|.|||.:|.:|:..|.||
  Fly     1 MQYTLLFIAALLLSLAQARPQVRGQAPGEPIPIIRQEQEVNFDGSYKYLYETGNGINAEEEGYLK 65

  Fly    52 NVGTDEEALNVKGTYSFVADDGQTYSIAYTADENGYQPQGAHLPVAPVV 100
            |.|||......:|::|:.:.:|....|.|.|||||:||||.|||..|.:
  Fly    66 NPGTDNAGQVAQGSFSYTSPEGIPIRITYLADENGFQPQGDHLPTPPPI 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65AfNP_477274.1 Chitin_bind_4 32..87 CDD:278791 22/54 (41%)
Cpr49AaNP_001097285.1 Chitin_bind_4 46..101 CDD:278791 22/54 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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