Protein Alignment Vha68-2 and ATPsynbetaL

DIOPT Version :9

• Sequence 1: NP_001246015.1
• Gene: Vha68-2 / 45012
• FlyBaseID: FBgn0263598
• Length: 614
• Species: Drosophila melanogaster
• Sequence 2: NP_648836.2
• Gene: ATPsynbetaL / 39761
• FlyBaseID: FBgn0036568
• Length: 622
• Species: Drosophila melanogaster
• Alignment Length: 609
• Identity: 142/609 - (23%)
• Similarity: 238/609 - (39%)
• Gaps: 149/609 - (24%)

  Fly    11 ERESKYGRVFAVSGPVV------------TAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQ 63
            |.:.:.|.:.||.|||:            .|..:..:.:..||...::.|...|:|       ..
  Fly    98 ESKGRKGVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIANLVLEVFHHLGNNIVR-------CV 155

  Fly    64 VYEETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELTESIYIPKGVNVPSLSRV 128
            ..:.|.|:..|.|||.||.|:.|.:|..::|.|.:.:..|:.|..|:.
  Fly   156 AMDSTEGLRRGQPVLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEVK----------------- 203

  Fly   129 ASWEFNPLNVKVGSHITGGDLYGLVHENTLVKHKMIVNPRAKGTVRYIAPSGNYKVDDVVLETEF 193
                              .|.|..:|..                    ||    ::.|:.::.|.
  Fly   204 ------------------SDFYSFIHNE--------------------AP----ELTDLSVKPEI 226

  Fly   194 DGEITKHTMLQVWPVRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQ 258
                                          |:||.:|:|.|.|.|:||...:.|..|.||||:..
  Fly   227 ------------------------------LVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIM 261

  Fly   259 ALSK---YSNSDVIIYVGCGER---GNEMSEVLRDFPELSVEIDGVTESIMKRTALVANTSNMPV 317
            .|..   .|:....::||.|||   ||::...:.:...:|:|.|.      .:..||....|.|.
  Fly   262 ELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESKVISLEDDS------SKVVLVFGQMNEPP 320

  Fly   318 AAREASIYTGITLSEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLAS 381
            .||...:.||:|::|||||: |.:|.:..|:..|:.:|..|:|..|..:|:..||...||..:.:
  Fly   321 GARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGT 385

  Fly   382 FYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSIN 446
            ..||.       ...|.||::.|.||..|..|.|||..:||...:.....|.:.:|:...:|:::
  Fly   386 MQERI-------TSTRNGSITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVD 443

  Fly   447 WLISYSKYMRALDDFYDKNFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITL----E 507
            .|.|.|   |.||.  |....|...:...|::.||..:.|.:|:.::|...|:|.||:|:    :
  Fly   444 PLDSSS---RILDP--DVVGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEEDKLTVARARK 503

  Fly   508 VAKLLKDDFLQQNSYSSY-DRFCPFYKTVGMLRNII--DFYDMARHSVESTAQSENKITWNVIRE 569
            :.:.|...|.....::.: .:..|..|.|...:.::  ::.|:...:......:|         |
  Fly   504 MQRFLSQPFQVAEIFTGHPGKLVPVEKCVEGFKRLLNGEYDDIPEIAFYMVGDAE---------E 559

  Fly   570 AMGNIMYQLSSMKFKDPVKDGEAK 593
            .:.......:||....|....|||
  Fly   560 VLAKATQLAASMSGDAPPAKAEAK 583

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha68-2	NP_001246015.1	V-ATPase_V1_A	16..606	CDD:273411	141/604 (23%)
ATPsynbetaL	NP_648836.2	PRK09280	103..568	CDD:236447	135/587 (23%)
		ATP-synt_ab_N	106..173	CDD:280947	17/73 (23%)
		F1-ATPase_beta	175..454	CDD:238553	93/383 (24%)
		ATP-synt_ab_C	462..571	CDD:278722	19/117 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454775
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840