DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha68-2 and atp6v1al

DIOPT Version :9

Sequence 1:NP_001246015.1 Gene:Vha68-2 / 45012 FlyBaseID:FBgn0263598 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_031747187.1 Gene:atp6v1al / 394868 XenbaseID:XB-GENE-22169633 Length:617 Species:Xenopus tropicalis


Alignment Length:614 Identity:504/614 - (82%)
Similarity:564/614 - (91%) Gaps:1/614 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SNLKRFDDEERESKYGRVFAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYE 66
            |.|.:..|||:||..|.|..||||||.|..|:|:|||||||||:.||||||||||||:|||||||
 Frog     4 SKLPKLIDEEKESMMGFVHGVSGPVVIASQMAGAAMYELVRVGHAELVGEIIRLEGDLATIQVYE 68

  Fly    67 ETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELTESIYIPKGVNVPSLSRVASW 131
            |||||.||||||||||||||||||||||:||||||||||||.:||:|||||:|:||.:|||...|
 Frog    69 ETSGVCVGDPVLRTGKPLSVELGPGIMGNIFDGIQRPLKDITDLTKSIYIPRGINVTALSRDIKW 133

  Fly   132 EFNP-LNVKVGSHITGGDLYGLVHENTLVKHKMIVNPRAKGTVRYIAPSGNYKVDDVVLETEFDG 195
            ||.| .:::.|||:||||:||:|.||:|:|||::|.||:.|||.||||.|||.:.|||:|.:|:|
 Frog   134 EFLPDKSIRAGSHVTGGDIYGIVTENSLIKHKIMVPPRSCGTVTYIAPPGNYDISDVVMELDFEG 198

  Fly   196 EITKHTMLQVWPVRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQAL 260
            ...|.||:|||||||.||..||||||:||||||||||:|||||||||||||||||||||||||||
 Frog   199 VKEKLTMVQVWPVRQIRPAAEKLPANYPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQAL 263

  Fly   261 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKRTALVANTSNMPVAAREASIY 325
            |||||||||:|||||||||||||||||||||::|:||.||:|||||.||||||||||||||||||
 Frog   264 SKYSNSDVIVYVGCGERGNEMSEVLRDFPELTMEVDGKTETIMKRTTLVANTSNMPVAAREASIY 328

  Fly   326 TGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVK 390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:
 Frog   329 TGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVR 393

  Fly   391 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYM 455
            |||:|.||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||
 Frog   394 CLGSPRREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYM 458

  Fly   456 RALDDFYDKNFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQN 520
            ||||:||::|||:.|||||||||||||||||:||||||||.||||.||||||||||:||||||||
 Frog   459 RALDEFYERNFPDLVPLRTKVKEILQEEEDLAEIVQLVGKGSLAEADKITLEVAKLIKDDFLQQN 523

  Fly   521 SYSSYDRFCPFYKTVGMLRNIIDFYDMARHSVESTAQSENKITWNVIREAMGNIMYQLSSMKFKD 585
            .||:|||||||||||||::|:|.|||||||:||:|||:||||||.:|||.:|:|:|:||||||||
 Frog   524 GYSAYDRFCPFYKTVGMIQNMIAFYDMARHAVEATAQAENKITWAIIRENLGDILYKLSSMKFKD 588

  Fly   586 PVKDGEAKIKADFEQLHEDLQQAFRNLED 614
            ||||||||||||:.||||::|.|||:|||
 Frog   589 PVKDGEAKIKADYAQLHEEMQNAFRSLED 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-2NP_001246015.1 V-ATPase_V1_A 16..606 CDD:273411 490/590 (83%)
atp6v1alXP_031747187.1 V-ATPase_V1_A 19..609 CDD:273411 490/589 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 278 1.000 Domainoid score I1682
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1027 1.000 Inparanoid score I278
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D160349at33208
OrthoFinder 1 1.000 - - FOG0001869
OrthoInspector 1 1.000 - - otm48091
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1565
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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