Protein Alignment gsx1 and ro

DIOPT Version :10

• Sequence 1: NP_001012251.1
• Gene: gsx1 / 449875
• ZFINID: ZDB-GENE-041008-135
• Length: 243
• Species: Danio rerio
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 208
• Identity: 58/208 - (27%)
• Similarity: 82/208 - (39%)
• Gaps: 59/208 - (28%)

Zfish    15 NSEKGTENSP--------------PLFPYAVH----PSHPLHSLSAGSCHSRKAGLLCFCPLCVT 61
            :|:.|:.:||              |.:.:..|    |.||.........|......|....|...
  Fly    79 HSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQKLSYV 143

Zfish    62 SQLHPSPPAL-------PLIKASFPAFGTQYCHSALSRQHSTSSGVNLNSGSGLYQAAYPVPDPR 119
            |    .|||:       |::..:|||              ...|..:.::|...:.|.....:.|
  Fly   144 S----PPPAIAAGGAANPVLPHAFPA--------------GFPSDPHFSAGFSAFLARRRRKEGR 190

Zfish   120 QFHCISIENSSSQLQSSKRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWF 184
            |                :|.||.|::.|.|.||.||..|.|:||.||.|:|..|.|:|.|:||||
  Fly   191 Q----------------RRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWF 239

Zfish   185 QNRRVKHKKEGKS 197
            ||||.|.|:..|:
  Fly   240 QNRRAKDKRIEKA 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsx1	NP_001012251.1	Homeodomain	137..193	CDD:459649	31/55 (56%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	29/51 (57%)