Protein Alignment gsx1 and pb

DIOPT Version :10

• Sequence 1: NP_001012251.1
• Gene: gsx1 / 449875
• ZFINID: ZDB-GENE-041008-135
• Length: 243
• Species: Danio rerio
• Sequence 2: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Alignment Length: 270
• Identity: 82/270 - (30%)
• Similarity: 113/270 - (41%)
• Gaps: 83/270 - (30%)

Zfish    19 GTENSPPLFPYAVHPSHPLHSLSAGSCHSRKA-----------GLLCFCPLCVTSQLHPSPPALP 72
            |.:..||:      ||..:.:....:|..|.|           |.:...|.......|.||.:
  Fly    62 GQQGVPPV------PSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPES-- 118

Zfish    73 LIKASFPAFGTQYCHSALSRQHSTSSGVNLNSGSGLYQAAYPV------PDPRQFHCISI----- 126
                  |..||.....|:.   .....||:|.|.|:   .|||      ||...    |:
  Fly   119 ------PKIGTPVGSGAIG---GVGVNVNVNVGVGV---GYPVGVVPQTPDGMD----SVPEYPW 167

Zfish   127 ----------ENSSSQLQSS-----------KRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIA 170
                      .|:::|..:|           :|:|||:|:|||||||:||..|.||.|.||||||
  Fly   168 MKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIA 232

Zfish   171 TYLNLSEKQVKIWFQNRRVKHKKEGKSGSHRTGAHNCKCS-------------SSLSSARCSEEE 222
            ..|:|:|:|||:||||||:|||::..|   :|...:.|.|             |..|...|....
  Fly   233 ASLDLTERQVKVWFQNRRMKHKRQTLS---KTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPS 294

Zfish   223 DDLPMSPPSS 232
            ||:|.|..:|
  Fly   295 DDIPDSTSNS 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsx1	NP_001012251.1	Homeodomain	137..193	CDD:459649	38/55 (69%)
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	38/55 (69%)