Protein Alignment gsx1 and lms

DIOPT Version :10

• Sequence 1: NP_001012251.1
• Gene: gsx1 / 449875
• ZFINID: ZDB-GENE-041008-135
• Length: 243
• Species: Danio rerio
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 206
• Identity: 56/206 - (27%)
• Similarity: 78/206 - (37%)
• Gaps: 63/206 - (30%)

Zfish     2 PRSFLVDSLILRENSEKGTENSPPLFPYAVHPSHPLHSLSAGSCHSRKAGLLCFCPLCVTSQLHP 66
            |.||.::.::.:......|.     |..:|..    .|...|:|
  Fly    11 PHSFSIEQILAKPEMRSSTS-----FEDSVQD----ESGRGGNC--------------------- 45

Zfish    67 SPPALPLIKASFPAFGTQYCHSALSRQHSTSSGVNLNS--GSGLYQAAYPVPDPRQFHCISIENS 129
                |...:||.||  |..|..  .......|.::|.|  |:||       .|.|:
  Fly    46 ----LGASRASSPA--TSSCLD--DNMDDGKSDIDLASDDGNGL-------GDDRK--------- 86

Zfish   130 SSQLQSSKRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 194
                   ||.||||::.|:..||.||....|||..:|..:|..|.|:|.|:||||||||.|.|::
  Fly    87 -------KRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRK 144

Zfish   195 GKSGSHRTGAH 205
            ..|......:|
  Fly   145 YTSDVETLASH 155

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsx1	NP_001012251.1	Homeodomain	137..193	CDD:459649	29/55 (53%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	29/128 (23%)
		Homeodomain	87..143	CDD:459649	29/55 (53%)