Protein Alignment gsx1 and scro

DIOPT Version :10

• Sequence 1: NP_001012251.1
• Gene: gsx1 / 449875
• ZFINID: ZDB-GENE-041008-135
• Length: 243
• Species: Danio rerio
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 310
• Identity: 82/310 - (26%)
• Similarity: 109/310 - (35%)
• Gaps: 95/310 - (30%)

Zfish     7 VDSLILRENSEKGTENSPPLFPYAVHPSHPLHSLSA----GSCHSRKAGLLC----FCPLCVTSQ 63
            ||:......:|..|:|:... ..|...:|..|:||:    .:.||:....|.    ..|..||..
  Fly    58 VDTSTKLNTNETSTQNTVST-AAAAAVAHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDI 121

Zfish    64 LHP----------------------------SPPALPLIKASFP-AFGTQYCHS----------- 88
            |.|                            ||..|.....:.| |.||.| ||
  Fly   122 LSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLY-HSPGVQTYCGPTD 185

Zfish    89 ---------------------------ALSR-QHSTSSGVNLNSG--SGLYQAAYPVPD--PRQF 121
                                       |:|| ..|::||...:.|  |||  ||..|.|  |.||
  Fly   186 NLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGL--AACSVSDSKPLQF 248

Zfish   122 HCISIENSSSQLQSSKRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQN 186
                      .|...::.|..||..|:.||||.|....|||...|..:|:.::|:..||||||||
  Fly   249 ----------PLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQN 303

Zfish   187 RRVKHKKEGK-SGSHRTGAHNCKCSSSLSSARCSEEEDDLPMSPPSSEKE 235
            .|.|.|::.| ........||...||....|.....:|..|.|..:|..:
  Fly   304 HRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQ 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gsx1	NP_001012251.1	Homeodomain	137..193	CDD:459649	25/55 (45%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	25/55 (45%)