DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom40 and AT1G50400

DIOPT Version :9

Sequence 1:NP_001259313.1 Gene:Tom40 / 44978 FlyBaseID:FBgn0016041 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_175457.1 Gene:AT1G50400 / 841462 AraportID:AT1G50400 Length:310 Species:Arabidopsis thaliana


Alignment Length:335 Identity:93/335 - (27%)
Similarity:152/335 - (45%) Gaps:57/335 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PSNSGSLTESSSSAEGLDSLAAAKDAALENPGTVEELHKKC-KDIQAITFEGAKIMLNKGLSNHF 93
            |.|:..:...:...|.:|.      :.|..|...|||:::. ..::...|||.::..||.|:..|
plant     7 PINTAQVDAKTKLDEKVDY------SNLPCPVLYEELNREATMALKPELFEGFRLDYNKSLNQKF 65

  Fly    94 QVSHTINMS-----NVVPS---------GYRFGATYVGTKEFSPTEAFPVLLGDIDPAGNLNA-- 142
            .:||:|.|.     |..||         .|.|||.::..|.:        |:|.|...|.|||  
plant    66 FLSHSILMGPTEVPNPTPSSEIIKIPTANYDFGAGFIDPKLY--------LIGRITTDGRLNARA 122

  Fly   143 --NVIHQFSARLRCKFASQIQESKVVASQLTTDYRGSDYTLSLTVANPSIFTNSGVVVGQYLQSV 205
              ::...||.:.......:..:|:   ..|..||:||||...|.:.|.|::      ...|:|.|
plant   123 KFDLTDNFSVKANALLTDEEDKSQ---GHLVIDYKGSDYRTQLQLGNNSVY------AANYIQHV 178

  Fly   206 TPALALGSELAYQFGPNVPGRQIAIMSVVG---RYTAGSSVWSGTLGQSGLHVC-YYQKASDQLQ 266
            ||.|:||.| |:..|..       :||.||   ||....:|.||.:..:|:.|. |..|.|::|.
plant   179 TPHLSLGGE-AFWLGQQ-------LMSGVGYAARYETDKTVASGQIASTGVAVMNYVHKVSEKLS 235

  Fly   267 IGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLEKRLAPLPFTLALSGRMNHV 331
            ...:...:...::..|::.|.:...::.|  ||.:|||..:...||::| |:.....||..::||
plant   236 FATDFIYNYLSRDVTASVGYDLITRQSRL--RGKVDSNGVVAAYLEEQL-PIGLRFLLSAEVDHV 297

  Fly   332 KNNFRLGCGL 341
            |.:::.|.|:
plant   298 KKDYKFGFGV 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom40NP_001259313.1 Porin3_Tom40 57..344 CDD:132766 89/308 (29%)
AT1G50400NP_175457.1 Porin3_Tom40 28..308 CDD:132766 89/308 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I2428
eggNOG 1 0.900 - - E1_KOG3296
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101105
Inparanoid 1 1.050 102 1.000 Inparanoid score I2156
OMA 1 1.010 - - QHG55758
OrthoDB 1 1.010 - - D1346842at2759
OrthoFinder 1 1.000 - - FOG0001620
OrthoInspector 1 1.000 - - mtm1190
orthoMCL 1 0.900 - - OOG6_101593
Panther 1 1.100 - - O PTHR10802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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